Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq12171 167 4e-39 seq16241 77.0 5e-12 >seq12171 Length=17760 Score = 167 bits (184), Expect = 4e-39 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 10346 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 10287 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||||||||||||||||| Sbjct 10286 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 10247 Score = 95.1 bits (104), Expect = 2e-17 Identities = 84/104 (81%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 10594 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 10536 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| || || | | |||| | |||||||| || Sbjct 10535 AATCTCGGTACTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 10492 >seq16241 Length=12073 Score = 77.0 bits (84), Expect = 5e-12 Identities = 47/50 (94%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTG 65 ||| |||||||||||||| |||||| |||||||||||||||||||||||| Sbjct 983 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTG 934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796130994270