Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq42316 87.8 7e-15 >seq42316 Length=2630 Score = 87.8 bits (96), Expect = 7e-15 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 136 CGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCA 195 |||||||| | ||||||||||| ||||| || ||||||||| |||| | | |||||||| Sbjct 193 CGCTGCACTTCAATGCATTTCGTGGAGAGCCGGCTATCACGTAGTTAGGTAGGCCTTTCG 252 Query 196 CCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCC 246 |||||| ||| ||||||| | | | | |||| ||| ||||||| || Sbjct 253 CCCCTAAACACGAGTCATCCAATTACTCTACAACGTAAACTGGTTCGGCCC 303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1816024686080