Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq9280 75.2 3e-11 >seq9280 Length=24550 Score = 75.2 bits (82), Expect = 3e-11 Identities = 132/190 (69%), Gaps = 7/190 (4%) Strand=Plus/Minus Query 203 TCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAAC----AAAGTGGGCTCCCACTG 258 |||||||| |||||| |||||||||| | | |||| ||| | | ||| |||| Sbjct 12407 TCGCTGACTCATTATGCAAAAGGTACATCATTATCCAATTTTTAAATTAGACTCTGACTG 12348 Query 259 CTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTT 318 ||| || ||| ||||||||||||||||| | || || ||||||| ||| Sbjct 12347 CTTATAGATTAACGATTTCAGGATCTATTTCA--CAAGTCATCGACTGTCTTTTCATCTT 12290 Query 319 TCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTC 378 || |||||| |||| |||||||| | | | | | ||||||||||| || |||| | Sbjct 12289 TCACTCACGTTACT-CTTCACTATTGATGATCTAATCATATTTAGCCTTAGAAGATGATT 12231 Query 379 CCCCCATATT 388 | || |||| Sbjct 12230 ACTCCTTATT 12221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1240523905280