Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq16241 73.4 2e-11 seq12171 73.4 2e-11 >seq16241 Length=12073 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 1179 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTATGTACAAAGGGCAGGGACG 1122 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 1121 TAAT-CAATGCGAG 1109 >seq12171 Length=17760 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 10790 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTATGTACAAAGGGCAGGGACG 10733 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 10732 TAAT-CAATGCGAG 10720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300555590600