Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq86241 73.4 1e-10 seq9280 73.4 1e-10 >seq86241 Length=1006 Score = 73.4 bits (80), Expect = 1e-10 Identities = 63/78 (81%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 262 TAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCC 321 |||||||| ||||| |||| || |||||||| || ||||||||||||||| ||||||| Sbjct 806 TAACTGACGTTGAGGGACGAAGGCTTGGGGAGCGAATAGGATTAGATACCCTAGTAGTCC 865 Query 322 ACGCCGTAAACGATGAAT 339 | || | || |||||| Sbjct 866 AAGCAGAGAATTATGAAT 883 >seq9280 Length=24550 Score = 73.4 bits (80), Expect = 1e-10 Identities = 60/72 (83%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 266 TGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACC-CTGGTAGTCCACG 324 |||| ||||| |||||||| |||| |||||| ||||||| ||| ||| ||||||| | Sbjct 2540 TGACGTTGAGGATCGAAAGCATGGGTAGCAAAAGAGATTAGAGACCTCTGATAGTCCATG 2599 Query 325 CCGTAAACGATG 336 |||||||||||| Sbjct 2600 CCGTAAACGATG 2611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202157186560