Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq37690 84.2 7e-12 >seq37690 Length=3112 Score = 84.2 bits (92), Expect = 7e-12 Identities = 105/142 (74%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 2773 GTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCAACT 2832 ||||| |||||||||||||| |||||||| | ||||||||| | | |||||| Sbjct 2909 GTATCCCACCGTTCAGGTGAGACTGAAGACACTTTCATCGCTGATCTCGTCGTTGCACTC 2850 Query 2833 AACGCTGGTCAAATTAAGACAGGT--TCATTGTCACGTACTGACCGTATTGCTAAATACA 2890 | |||||||||| ||| ||||| || ||| |||||||| ||| | || || |||| Sbjct 2849 CAAACTGGTCAAATCAAGTCAGGTGCTCCTTG--CCGTACTGAACGTCTCGCAAAGTACA 2792 Query 2891 ACCAATTGCTTCGTATCGAAGA 2912 ||| ||||| | || ||||| Sbjct 2791 ACCGTTTGCTCAGAATTGAAGA 2770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155877804303480