Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq7698 102 3e-16 >seq7698 Length=30036 Score = 102 bits (112), Expect = 3e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 21708 GGGGTCGAGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAAAG 21767 || || |||||||| ||||| ||||| || ||||| || || || | |||| ||| Sbjct 10082 GGCGTGGAGATGCGCTCCAGAATGAGCTGAGCGATACGGTCACCGCGAGTGATCCTAAAC 10023 Query 21768 TCCTGGTCAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCCTATAAGAACTGTCGACG 21827 |||| || |||||||||||| | ||||||||| || | || ||||| | Sbjct 10022 TCCTCATCGCTGTGGTTGAAGAGAATCACCCCGACTGGACCACGGTAGTCGACGTCGATG 9963 Query 21828 ACCCCGGCGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGCGACGCGG 21887 || || || |||||||| | ||||||| |||| ||||| || | |||||| || ||| Sbjct 9962 ACGCCAGCACCGACGTCAATGGAGTTCTTCCAGGCGAGACCAGAACGGGGAGCCACACGG 9903 Query 21888 CCGTAGTGGCCCTTTGGGATGGCCAT 21913 |||||| ||||| || | ||| || Sbjct 9902 GCGTAGTAGCCCTGCGGAAAGGCGAT 9877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2082367717952660