Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_033034.1
Length=13000
Score E
Sequences producing significant alignments: (Bits) Value
seq44943 105 6e-19
>seq44943
Length=2415
Score = 105 bits (116), Expect = 6e-19
Identities = 164/231 (71%), Gaps = 5/231 (2%)
Strand=Plus/Minus
Query 8046 GGACGTTTCTTTTCATTAATGTCTTGGAAGCTGAGAGAATATTTTGTAATAACTGAATAT 8105
||| | || |||| ||||||||||||| || ||||| || ||||| | |||| |||
Sbjct 857 GGAAGATTATTTTGTTTAATGTCTTGGACACTAAGAGACTACTTTGTCA---CTGAGTAT 801
Query 8106 CTCATAAA-AACCTTTTATGTCCCTCTTTTTTATGGATTAACAATGGCTGATGACTTAGT 8164
| ||||| || | || |||| || ||||| ||| |||||||||| ||||| |||
Sbjct 800 TTGATAAAGAATCACTTCGTTCCC-CTCTTTTACGGACTAACAATGGCAGATGATTTAAC 742
Query 8165 TACTGTTATGAGAAAAATGCTCGAAACATCATCTGGACAAGGATTGGATAATTATGATGT 8224
||||| |||| ||| ||| | |||| || || |||||| | ||| | || ||
Sbjct 741 AACTGTAATGAAAAAGATGATGGAAAGCTCCAGTGCACAAGGGTCTGATGACTACGAATA 682
Query 8225 GATCTATTTGGCCAATCACATCGATTATGAGAAATGGAATAACCACCAACG 8275
|| | | | || || ||| | || || ||||| || ||||||||||| ||
Sbjct 681 CATTTCTATAGCAAACCACCTAGACTACGAGAAGTGTAATAACCACCAGCG 631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 41444350764320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |