Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_033070.1
Length=11145
Score E
Sequences producing significant alignments: (Bits) Value
seq44943 78.8 7e-11
>seq44943
Length=2415
Score = 78.8 bits (86), Expect = 7e-11
Identities = 156/227 (69%), Gaps = 7/227 (3%)
Strand=Plus/Minus
Query 6163 AAGTTTTTGAAACAGGTTAATGACACAGGTATATCAGA-AGATCATCTGATCATTGGATT 6221
|||||| | ||||||| ||||| | || | | || || ||||| || ||||| ||
Sbjct 947 AAGTTTCTTCAACAGGTCAATGATAATGGAAC-TGAGTTAGGGCATCTTATAATTGGGTT 889
Query 6222 AAGAGCAAAAGAGCGAGAACTTAAAGAAGAAGGAAGGTTCTTTGCACTTATGTCTTGGGA 6281
|| | ||| | || | | ||| | ||||| || ||| | |||||||||
Sbjct 888 AAAACAGAAACAAGGACAGATCAAACTCAAGGGAAGATTATTTTGTTTAATGTCTTGGAC 829
Query 6282 AATCAGAGATTATTTTGTGATGACAGAGTATCTTATCAAAACACACTTTGTACCTCTGTT 6341
| | ||||| || ||||| | | |||||| | || || | ||||| || || || ||
Sbjct 828 ACTAAGAGACTACTTTGTCA---CTGAGTATTTGATAAAGAATCACTTCGTTCCCCTCTT 772
Query 6342 CAAAGGTCTGACAATGGCAGACGATTTGACAACTGTAATCGGAAAAA 6388
| || || ||||||||||| ||||| ||||||||||| ||||||
Sbjct 771 TTACGGACTAACAATGGCAGATGATTTAACAACTGTAAT--GAAAAA 727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35514138586920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |