Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= AAMG01000056.1 Length=332 Score E Sequences producing significant alignments: (Bits) Value seq52333 77.0 6e-12 >seq52333 Length=5662 Score = 77.0 bits (84), Expect = 6e-12 Identities = 95/128 (74%), Gaps = 3/128 (2%) Strand=Plus/Plus Query 203 AGTAACGGAATACTAACC-GTTTCTGCCATCGGTCTCGCCGTTCGGCTGAACCTTATGAC 261 |||| |||||| ||||| ||||| |||||| ||| ||| || ||||| | Sbjct 3730 AGTACAGGAATATTAACCTGTTTC--CCATCGACTACGCATTTCTACTTTGCCTTAGGGG 3787 Query 262 CCGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGT 321 |||||| |||||| |||||||||| || ||||||||||| | ||||||||| | ||| Sbjct 3788 CCGACTCACCCTGCGCCGATTAGCGTTGCGCAGGAAACCTTGGACTTTCGGCGTGTAGGT 3847 Query 322 TTCCCACC 329 || |||| Sbjct 3848 TTTTCACC 3855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 958127193600