Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq149210 161 9e-38 seq123339 161 9e-38 seq115184 161 9e-38 seq52333 158 1e-36 seq194959 152 5e-35 >seq149210 Length=2481 Score = 161 bits (178), Expect = 9e-38 Identities = 92/94 (98%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 65 GCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 124 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2304 GCTGCGACTGTTTACTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 2363 Query 125 TGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 |||||||||||||||||||||||||||| ||||| Sbjct 2364 TGACGCCTGCCCGGTGCCGGAAGGTTAAGTGATG 2397 >seq123339 Length=2740 Score = 161 bits (178), Expect = 9e-38 Identities = 92/94 (98%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 65 GCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 124 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1073 GCTGCGACTGTTTACTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 1132 Query 125 TGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 |||||||||||||||||||||||||||| ||||| Sbjct 1133 TGACGCCTGCCCGGTGCCGGAAGGTTAAGTGATG 1166 >seq115184 Length=93111 Score = 161 bits (178), Expect = 9e-38 Identities = 92/94 (98%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 65 GCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 124 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 66555 GCTGCGACTGTTTACTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 66496 Query 125 TGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 |||||||||||||||||||||||||||| ||||| Sbjct 66495 TGACGCCTGCCCGGTGCCGGAAGGTTAAGTGATG 66462 >seq52333 Length=5662 Score = 158 bits (174), Expect = 1e-36 Identities = 102/112 (91%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||| | | |||||||| |||||||||||||| ||||||||||||||||||||||| || Sbjct 3384 GGTTGCAAATACCAGGTGGCTGCGACTGTTTACTAAAAACACAGCACTCTGCAAACTCGT 3325 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 ||| |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 3324 AAGAGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAAATGATG 3273 >seq194959 Length=11641 Score = 152 bits (168), Expect = 5e-35 Identities = 90/94 (96%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 65 GCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 124 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10364 GCTGCGACTGTTTAATAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 10423 Query 125 TGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 ||||||||||||||||| ||||| |||| ||||| Sbjct 10424 TGACGCCTGCCCGGTGCTGGAAGATTAAATGATG 10457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475898907004