Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq121370 111 2e-22 seq121475 80.6 4e-13 >seq121370 Length=7911 Score = 111 bits (122), Expect = 2e-22 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 67 GGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCCAGG 126 || || || ||||| ||||| || || ||||| || |||||||||||||| ||||| ||| Sbjct 6888 GGGGCCTCCTCCAGCACCTTTTGATGGCGACGCTGGAGCGAGCAATCGCGCTCGCCGAGG 6947 Query 127 TGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGGTTGGTC 186 |||||||||| ||| | ||||||| | || || | ||| | || || |||||| Sbjct 6948 TGGATGGCGTTGCCGTTGCCGTCGCCGAACACCTGGAATTCGATATGGCGCGGGTTGCCG 7007 Query 187 AGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAAC 222 ||||| ||||||| ||||| ||| || |||||| Sbjct 7008 AGGTATTTTTCCATATAGACGGTCGCGTCACCGAAC 7043 >seq121475 Length=4153 Score = 80.6 bits (88), Expect = 4e-13 Identities = 79/102 (77%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 49 TCGTCCAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAG 108 ||||||| ||| || || || ||||| || | ||||||||||| || || || |||||| Sbjct 1983 TCGTCCATGCCGGGGGCGGGGGCTTCCTCGATCACCTTCTGGTGGCGGCGCTGGAGCGAG 2042 Query 109 CAATCGCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCG 150 |||||||| ||| || ||||| | ||| ||| ||| |||| Sbjct 2043 CAATCGCGCTCGAACAAGTGGACGACGTTGCCGTGGGTGTCG 2084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 734609051080