Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= AAMG01001377.1 Length=151 Score E Sequences producing significant alignments: (Bits) Value seq195024 82.4 6e-14 >seq195024 Length=163274 Score = 82.4 bits (90), Expect = 6e-14 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 12 GAAGATGCCATCGCCCAAGTGCGCGCCCAGGTCGGCACTGACAACGTATTGCTTGGCCTG 71 ||||| || |||||| | | |||| || |||||| || | || | || | |||| Sbjct 68385 GAAGAGGCTATCGCCAATATCCGCGAACAAGTCGGCGACGAAGAAGTCATTCTGGCCCTG 68326 Query 72 TCCGGCGGCGTTGACTCCTCGGTTGTAGCGGCACTGCTGCACAAGGCCATCGGCGACCAA 131 ||||| || || || |||||||||| || || ||| | ||| | || ||||||||| | Sbjct 68325 TCCGGTGGTGTGGATTCCTCGGTTGCTGCCGCTCTGATCCACCAAGCTATCGGCGACAAG 68266 Query 132 CTGACCTGCGTGTTTGTCGA 151 ||||||||||| || || || Sbjct 68265 CTGACCTGCGTATTCGTGGA 68246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 386491845080