Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq3566 206 4e-51 seq1772 206 4e-51 seq3051 196 7e-48 >seq3566 Length=7760 Score = 206 bits (228), Expect = 4e-51 Identities = 185/226 (82%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 5411 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 5468 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | || || | ||||| | | |||| | || Sbjct 5469 CTCGTTCATGGGGAACAATTGCAAGCCCCAATTCCTAGCACGAAGGAGGTTCAGCGGGTT 5528 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||||||| || || || | ||| | | ||||||||||||||||||| Sbjct 5529 ACCCGGGCCTTTCGGCCAGGGAAGTACACGC--TGATTCCTTCAGTGTAGCGCGCGTGCG 5586 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 5587 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 5631 >seq1772 Length=26971 Score = 206 bits (228), Expect = 4e-51 Identities = 185/226 (82%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 11953 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 12010 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | || || | ||||| | | |||| | || Sbjct 12011 CTCGTTCATGGGGAACAATTGCAAGCCCCAATTCCTAGCACGAAGGAGGTTCAGCGGGTT 12070 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||||||| || || || | ||| | | ||||||||||||||||||| Sbjct 12071 ACCCGGGCCTTTCGGCCAGGGAAGTACACGC--TGATTCCTTCAGTGTAGCGCGCGTGCG 12128 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 12129 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 12173 >seq3051 Length=10318 Score = 196 bits (216), Expect = 7e-48 Identities = 184/227 (81%), Gaps = 7/227 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 9208 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 9265 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | || || | ||||| | | |||| | || Sbjct 9266 CTCGTTCATGGGGAACAATTGCAAGCCCCAATTCCTAGCACGAAGGAGGTTCAGCGGGTT 9325 Query 120 ACCCGGACC-TGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||||| || | ||||||| || || || | ||| | |||||||||||||||||| Sbjct 9326 ACCCGGGCCGTTTCGGCCAGGGAAGTACACGC--TGATTCTTTCAGTGTAGCGCGCGTGC 9383 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 9384 GGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 9429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751879527955