Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq202 152 2e-34 >seq202 Length=945038 Score = 152 bits (168), Expect = 2e-34 Identities = 156/200 (78%), Gaps = 3/200 (2%) Strand=Plus/Minus Query 53 GGCATTCGGAGTTTGGTT-GATTTCGGTAAGCTTGTGGG-CCCCCTAGACCATCCAGTGC 110 || ||||||||||| ||| ||||| |||||| ||| | |||||||| | ||||||||| Sbjct 548426 GGTATTCGGAGTTTAGTTAGATTT-GGTAAGTCGGTGAGTCCCCCTAGTCTATCCAGTGC 548368 Query 111 TCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCT 170 |||||| || || | ||| | ||||| |||||||| |||||| |||||||||||| Sbjct 548367 TCTACCCCCAATAACATACATACAACGCTCTACCTAAATAGATTTCGCGGAGAACCAGCT 548308 Query 171 ATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACC 230 || | ||||||||||||||||||||||||| |||| |||||| | | || |||| Sbjct 548307 ATTTCCAAGTTTGATTGGCCTTTCACCCCTAATCACAACTCATCCAATAATGTTGCAACA 548248 Query 231 TAAGTGGGTTCGGTCCTCCA 250 | | |||||| ||||||| Sbjct 548247 TTAACTGGTTCGATCCTCCA 548228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817299423488