Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq1209 118 2e-24 >seq1209 Length=44547 Score = 118 bits (130), Expect = 2e-24 Identities = 275/402 (68%), Gaps = 17/402 (4%) Strand=Plus/Minus Query 3 ATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTTGA 62 ||||||||||| || ||||| || | ||||| |||| |||||| |||| || || | Sbjct 17713 ATGGTCAGCAAATCACCGCCAACTTCCGTCCAGGCCAACCCAGTGGCCTGCCCAACGCGG 17654 Query 63 TCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGC-GCACGCCGAGGAAGTGCTCCAGGGA 121 | | | || || |||||||| | || || | ||||| ||||| | | ||| Sbjct 17653 TTTTCTTCATCCGCACGGCCGTAG-TCAAAGCGCTGAACGCCAAGGAAATCTTTAAGGTT 17595 Query 122 GTCGGCCGTGACCTTCACCGAG---AAGCGTTTT-TCCAGC-GCAT-GTTCCTTGACCGC 175 ||| |||| | || || | || ||||| |||| | ||| ||| || ||||| Sbjct 17594 ATCGCCCGTAATCT-CAATATGCTTAACGGTTTTATCCATCAGCAGCGTT--TTTACCGC 17538 Query 176 CTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTA 235 || ||||| | || | ||| | |||||||| | ||||| || ||||| || ||||| Sbjct 17537 TTTACGGCACAATTTGGAGATTTCACGCTCCAGACTGCGCACGCCAGCTTCACGCGTGTA 17478 Query 236 GTAGCGGACGATGTCGCGGATCGTGCCGACTTCAAATTCGATCTCGCCCTTCTTCAGGCC 295 ||| |||| ||| || ||| | | | | |||| | ||| || |||||||| | Sbjct 17477 GTAACGGATGATCCCGGAGATAGCACTGTCATCAACGGTCAACTCACCTTTCTTCAGTGC 17418 Query 296 ATTGGCCGAAATCTGCTTGGGC-GCGA--GGTACTTGATGGCGATGTTGATCTTCTCGTC 352 ||| ||| ||||| ||| || | || |||| || || || | |||||| || Sbjct 17417 GTTGCGTTCAATTTGCTTCGGCAGCAAATGGCGCTTG---GCAATATTAAGCTTCTCATC 17361 Query 353 TTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 |||||||| || | |||||||||||||||||| |||||||| Sbjct 17360 CTCGGTGTAGCCAGACAGGCGAATCACTTCCATACGGTCCAG 17319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158208435392