Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq2181 239 1e-60 >seq2181 Length=19217 Score = 239 bits (264), Expect = 1e-60 Identities = 314/433 (73%), Gaps = 8/433 (2%) Strand=Plus/Plus Query 3 ATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCC 62 |||||||||||||| || || ||||| || | || ||||| || ||||||||||| || Sbjct 13697 ATCAGGAACACTTCGCGCGCCCCGGCCCCTTGCGCAGATTCGCGAATGGCACGACGTTCA 13756 Query 63 ACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTG 122 ||||| || | | || || || | ||| || || ||||| || ||| || ||| Sbjct 13757 ACCTGAGTAGCACCGACTGGCACACACACCAGTACGCGTGGGCTCGGACGCATAAAGCTG 13816 Query 123 TTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCG 182 || ||| || | ||||| |||| ||||| ||| |||||| ||| |||||||||| Sbjct 13817 TTGCTGTGCACTTGTTTGATAAAGTGCTGCAACATTTTCTCGGTCACGAAGAAGTCGGCG 13876 Query 183 ATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATG 242 || || |||||||||||||| || || || || ||||| || || ||||| || ||||| Sbjct 13877 ATAACACCGTCTTTCATCGGGCGGATAGCTGCGATATTACCCGGAGTACGACCAAGCATC 13936 Query 243 CGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCATG---GGTC----CG 295 | ||||| || ||| |||||| |||| || || | ||| || | || || Sbjct 13937 TGTTTGGCTTCATGGCCTACGGCAGCGACGCTCTTAGGCGAACC-TGCACGATCCTGACG 13995 Query 296 AATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGT 355 || || || || || ||||||||||| || || || || | || ||||| ||||| Sbjct 13996 GATAGCGACCACAGACGGCTCATTCAGTACAATGCCCTGCCCTTTAACATAAATCAGGGT 14055 Query 356 GTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAA 415 ||||| ||||||||||| ||||| | ||| |||||||||||||||| | ||| || || Sbjct 14056 ATTGGCGGTGCCCAGGTCGATGGACAAGTCGTTGGAAAACATGCCACGAAATTTTTTAAA 14115 Query 416 CATGGGGAAAGGA 428 ||| ||||||| Sbjct 14116 CATAACGAAAGGA 14128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353376155168