Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq3566 84.2 2e-14 seq3051 84.2 2e-14 seq1772 73.4 4e-11 >seq3566 Length=7760 Score = 84.2 bits (92), Expect = 2e-14 Identities = 131/184 (71%), Gaps = 9/184 (5%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC------TTTGCTCGAATACAT 63 || || |||||||| ||||||||| | | ||||||||| | ||| ||||| Sbjct 6320 ACGTTCACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTGAAATATCTGCCTGAATAGTG 6261 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 |||||||| ||| || ||||| | |||||||||||||| ||||| ||||| | Sbjct 6260 GTGCATGGAATGATAAAACAGGACCT-CGGTTCTATTTTGTTGGTTT-TAGGAATATGAG 6203 Query 124 -TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 ||||||| ||| ||| | |||||| | ||||| || | ||||||||||||| Sbjct 6202 GTAATGATCAATGTGGACTGGCGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTT 6143 Query 183 GGAT 186 |||| Sbjct 6142 GGAT 6139 >seq3051 Length=10318 Score = 84.2 bits (92), Expect = 2e-14 Identities = 131/184 (71%), Gaps = 9/184 (5%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC------TTTGCTCGAATACAT 63 || || |||||||| ||||||||| | | ||||||||| | ||| ||||| Sbjct 10118 ACGTTCACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTGAAATATCTGCCTGAATAGTG 10059 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 |||||||| ||| || ||||| | |||||||||||||| ||||| ||||| | Sbjct 10058 GTGCATGGAATGATAAAACAGGACCT-CGGTTCTATTTTGTTGGTTT-TAGGAATATGAG 10001 Query 124 -TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 ||||||| ||| ||| | |||||| | ||||| || | ||||||||||||| Sbjct 10000 GTAATGATCAATGTGGACTGGCGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTT 9941 Query 183 GGAT 186 |||| Sbjct 9940 GGAT 9937 >seq1772 Length=26971 Score = 73.4 bits (80), Expect = 4e-11 Identities = 129/184 (70%), Gaps = 12/184 (7%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC------TTTGCTCGAATACAT 63 ||||| |||||||| ||||||||| | | ||||||||| | ||| ||||| Sbjct 12636 ACTTTCACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTGAAATATCTGCCTGAATAGTG 12577 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGG-ACCGCCC 122 |||||||| ||| || ||||| | |||||||||||||| ||||| |||| | Sbjct 12576 GTGCATGGAATGATACAACAGGACCT-CGGTTCTATTTTGTTGGTTT-TAGGAATATGAG 12519 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| ||| ||| | |||||| | ||||| || | ||||| ||||| Sbjct 12518 GTAATGATCAATGTGGACTGGCGGGGGCATTCGTATTGCGACGTTAGAGGTG---TTCTT 12462 Query 183 GGAT 186 |||| Sbjct 12461 GGAT 12458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511917976480