Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq3566 223 7e-56 seq1772 223 7e-56 seq3051 221 2e-55 >seq3566 Length=7760 Score = 223 bits (246), Expect = 7e-56 Identities = 207/258 (80%), Gaps = 5/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||| |||||| ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 5665 CTTCTTAAAGGGACAGGCGGCTTACAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 5608 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| ||||||||||||||||||||||||| || || || || | || Sbjct 5607 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGTACTTCC 5548 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 | |||||| |||| | |||||| | | || ||| ||||||| || || | | ||| Sbjct 5547 C--TGGCCGAAAGGCCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGAATTGGGGCTTG 5490 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 5489 CAATTGTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 5430 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 5429 ACGTCCCTGCCCTTTGTA 5412 >seq1772 Length=26971 Score = 223 bits (246), Expect = 7e-56 Identities = 207/258 (80%), Gaps = 5/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||| |||||| ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 12207 CTTCTTAAAGGGACAGGCGGCTTACAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 12150 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| ||||||||||||||||||||||||| || || || || | || Sbjct 12149 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGTACTTCC 12090 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 | |||||| |||| | |||||| | | || ||| ||||||| || || | | ||| Sbjct 12089 C--TGGCCGAAAGGCCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGAATTGGGGCTTG 12032 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 12031 CAATTGTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 11972 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 11971 ACGTCCCTGCCCTTTGTA 11954 >seq3051 Length=10318 Score = 221 bits (244), Expect = 2e-55 Identities = 208/259 (80%), Gaps = 6/259 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||| |||||| ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 9463 CTTCTTAAAGGGACAGGCGGCTTACAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 9406 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| ||||||||||||||||||||||||| ||| || || || | || Sbjct 9405 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAAGAATCAGCGTGTACTTCC 9346 Query 191 CCTTGGCCGGAA-GGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 | |||||| || || | |||||| | | || ||| ||||||| || || | | || Sbjct 9345 C--TGGCCGAAACGGCCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGAATTGGGGCTT 9288 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 |||||| || | | | |||||||||| || |||||||||| ||||| ||| ||||||||| Sbjct 9287 GCAATTGTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGAT 9228 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 9227 TACGTCCCTGCCCTTTGTA 9209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947043361536