Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq202 170 6e-40 >seq202 Length=945038 Score = 170 bits (188), Expect = 6e-40 Identities = 170/218 (78%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 69 TGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGAT 128 |||||||| ||||| || | ||||||| |||||| |||||||| || |||| |||| Sbjct 548207 TGAAGGTGTGGTAAAACACACTGGAGGATCGAACCAGTTAATGTTGCAACATTATTGGAT 548266 Query 129 GAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAA 188 ||| |||| |||||||||||||| || |||||||||||||||||||||||| ||||| Sbjct 548267 GAGTTGTGATTAGGGGTGAAAGGCCAATCAAACTTGGAAATAGCTGGTTCTCCGCGAAAT 548326 Query 189 CTATTTAGGTAGTGCCT--CAAGTATCACCATCGGGGGTAGAGCACTGTTATGGCTAGGG 246 |||||||||||| || | | |||| || ||||||||||||||| | |||||| Sbjct 548327 CTATTTAGGTAGAGCGTTGTATGTAT-GTTATTGGGGGTAGAGCACTGGATAGACTAGGG 548385 Query 247 GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAAT 284 || | |||||||||||| | ||||||||||| Sbjct 548386 GGACTCACCGACTTACCAAATCTAACTAAACTCCGAAT 548423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689320590848