Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_007902.1 Length=52162 Score E Sequences producing significant alignments: (Bits) Value seq4230 412 1e-110 seq1206 383 6e-102 seq3708 179 1e-40 seq2617 109 2e-19 seq1577 109 2e-19 seq2784 100 9e-17 seq6242 91.5 5e-14 >seq4230 Length=5747 Score = 412 bits (456), Expect = 1e-110 Identities = 480/645 (74%), Gaps = 7/645 (1%) Strand=Plus/Minus Query 23512 ATAGTACAGCAAGCTGCGAAACTGCTCTTTGGGATACGCCCACTGTTCGAGCAATCCGGC 23571 |||||||| || ||| || |||||||||||||| ||||||| | | ||||| | || Sbjct 1845 ATAGTACATCAGGCTACGGAACTGCTCTTTGGGTATCGCCCACAGATTGAGCAGGCGAGC 1786 Query 23572 CAGTTCGTTAACCAGCTCCAGCATATCACGGGTACGAATGTGCTTCTGCACCAGTTCCAG 23631 | || | | |||||||| || || |||||||| || || ||||| | |||||| Sbjct 1785 AATATCTCCGGCTAATTCCAGCATGTCCCGTGTACGAATATGTTTTTGCACAAATTCCAG 1726 Query 23632 CAGCGCCACCCGGCGATGGGTCAGGATTTCGTCATCCGGTATTGCAGTGATATCGACCAG 23691 ||| || ||||| ||||||| ||| ||||| ||||||| || || |||||||| ||||| Sbjct 1725 CAGGGCTACCCGCCGATGGGACAGTATTTCATCATCCGACATGGCGGTGATATCAACCAG 1666 Query 23692 CGGAAATGCCTGATGATAAACCGTGGCCGCCAATTCTGGCTCAGCAAAACAGTCCAGACA 23751 ||| |||||||| ||| || | | || | ||| || |||||||| || || || || Sbjct 1665 CGGGAATGCCTGTGTATAGACTGATTCTGCTAGTTCAGGGTCAGCAAAGCAATCGAGCCA 1606 Query 23752 GCGCGTGCTGTACGGATACGGCGACGTGGTGCCGTGGTAAAACAGCAGCGGAATGACCAC 23811 | |||||||| || || |||||||||||||||||||| ||||| ||||| |||||||| Sbjct 1605 TTGGGTGCTGTAGGGGTAGGGCGACGTGGTGCCGTGGTAGAACAGGAGCGGGATGACCAC 1546 Query 23812 CGGTAGCTGATCGTTGCCCTGTTCTAGATGCCGCTGCATCGCGGCGACCGCATACCGTAG 23871 || | |||||||| || || || ||||||||||| || || | ||| || | Sbjct 1545 GGGCAAGGTCTCGTTGCCTTGCTCCAGGTGCCGCTGCATGGCTGCCATGCTATAACGCAT 1486 Query 23872 CAATCGAAACGCCATCAGCTTTTCCGGGCGGCTCTGGTGCTCTATCAGACAGTAGACGTA 23931 || || ||||||||| ||| || || | ||||||||||| |||| ||||| || Sbjct 1485 TAAACGCCACGCCATCAACTTCTCGGGCCTACTCTGGTGCTCGATCAATGTGTAGATATA 1426 Query 23932 ACCATCATGGCCCGTCGTGGTCTTCATCGAGTAGAGCATATCCGAGCACTGGCCCTTCAG 23991 | | | ||||| | |||| || || |||||||||||||| |||||| ||| Sbjct 1425 GC---CTTTCCCCGTTTTTGTCTGCACGGAATAGAGCATATCCGAACACTGGGTGCGCAG 1369 Query 23992 GTCGTCTTCGATAAATGAGCCGGAAGCCATCGCCAATGTGCCGAAATCGCAGCGCTTACG 24051 ||||||||||||||| ||| || |||| |||| || | |||||||||||| | || Sbjct 1368 GTCGTCTTCGATAAAACTGCCCGACTCCATTGCCAGCGTACTGAAATCGCAGCGTTCCCG 1309 Query 24052 CAGGTGCGGCGGCAGATGGATTTCCAGAAAGTCCCGAGCGACCGCGATATCGCCAAGGAA 24111 || || || |||| |||||||||||||||||| || ||||||| ||||||||| ||||| Sbjct 1308 TAGATGAGGAGGCA-ATGGATTTCCAGAAAGTCTCGGGCGACCGTGATATCGCCGAGGAA 1250 Query 24112 CTTTTTGAATACGTGGTCATGGTGCGACAG---GGATTTCGTCAT 24153 |||||||| | | |||||| | || || |||||| ||||| Sbjct 1249 TTTTTTGAACAGGGAGTCATGTTTTGAGAGAAAGGATTTTGTCAT 1205 Score = 125 bits (138), Expect = 2e-24 Identities = 160/220 (73%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 23068 TGTGCTGCTTAACCGCGTGGATATCAGCACTGCGCCAGATATCGACTGGCTGGAGCCGCC 23127 |||||||||| |||| || ||| || |||| ||||| ||||| | |||| ||| ||| Sbjct 2176 TGTGCTGCTTTACCGGGTAGATGTCCGCACAGCGCCTGATATTGCGTGGCCGGAAGTGCC 2117 Query 23128 CGACGCGGAAAAGGCGGGGGATTAATGCCCGTCATCGAACAGGGAAGCCAGTTCGTCATC 23187 || | ||||| ||||| |||| | | ||| |||| || ||||||||||| || Sbjct 2116 TGAAGGTGAAAAAACGGGGAATTAGCGTCGGTCGTCGA---GGCTTGCCAGTTCGTCGTC 2060 Query 23188 GGAAAGACCCGTCGACATTTTGACGATAGCGCGATCGACACCATTGGCGATAAGTTGCCT 23247 ||| || || || || ||| ||| | | |||| | || || | | |||||| Sbjct 2059 GGACAGGCCGGTGCACGCTTTAACGGCATCACGATTAATTCCTCGGGTAAGCATTTGCCT 2000 Query 23248 TGCAATTTTCAGCGAGGCGCTATGCTCGCCTTCTTGGCGT 23287 ||||||||| ||||||||||||||||||||||| || ||| Sbjct 1999 TGCAATTTTGAGCGAGGCGCTATGCTCGCCTTCCTGCCGT 1960 >seq1206 Length=31275 Score = 383 bits (424), Expect = 6e-102 Identities = 408/536 (76%), Gaps = 7/536 (1%) Strand=Plus/Plus Query 23621 ACCAGTTCCAGCAGCGCCACCCGGCGATGGGTCAGGATTTCGTCATCCGGTATTGCAGTG 23680 ||||||||||||||||| ||||| | ||| ||||||||||||||||||||||||| || Sbjct 673 ACCAGTTCCAGCAGCGCTACCCGCCTATGCATCAGGATTTCGTCATCCGGTATTGCGGTA 732 Query 23681 ATATCGACCAGCGGAAATGCCTGATGATAAACCGTGGCCGCCAATTCTGGCTCAGCAAAA 23740 |||||||||| ||| |||||||| ||| || | | |||| ||| || |||||||| Sbjct 733 ATATCGACCAACGGGAATGCCTGTGTATAGACTGATTCTGCCAGTTCAGGGTCAGCAAAG 792 Query 23741 CAGTCCAGACAGCGCGTGCTGTACGGATACGGCGACGTGGTGCCGTGGTAAAACAGCAGC 23800 || || || || | |||||||| || || ||||||||||||| |||||| ||||| ||| Sbjct 793 CAATCGAGCCATTGGGTGCTGTAGGGGTAGGGCGACGTGGTGCTGTGGTAGAACAGGAGC 852 Query 23801 GGAATGACCACCGGTAGCTGATCGTTGCCCTGTTCTAGATGCCGCTGCATCGCGGCGACC 23860 || |||||||| || | |||||| | || || | |||||||||||||| | | Sbjct 853 GGGATGACCACGGGCAAGGTCTCGTTGTCTTGCTCCAAGTGCCGCTGCATCGCTTCCATG 912 Query 23861 GCATACCGTAGCAATCGAAACGCCATCAGCTTTTCCGGGCGGCTCTGGTGCTCTATCAGA 23920 ||| || | || || ||||||||| ||| || || | ||||||||||| |||| Sbjct 913 CTATAACGCATTAAACGCCACGCCATCAACTTCTCGGGCCTACTCTGGTGCTCGATCAAT 972 Query 23921 CAGTAGACGTAACCATCATGGCCCGTCGTGGTCTTCATCGAGTAGAGCATATCCGAGCAC 23980 ||||| || | | | ||||| | |||| || || |||||||||||||| ||| Sbjct 973 GTGTAGATATAGC---CTTTCCCCGTTTTTGTCTGCACGGAATAGAGCATATCCGAACAC 1029 Query 23981 TGGCCCTTCAGGTCGTCTTCGATAAATGAGCCGGAAGCCATCGCCAATGTGCCGAAATCG 24040 ||| |||||||||||||||||| || || ||||||| | |||| ||||||| Sbjct 1030 TGGGTGCGCAGGTCGTCTTCGATAAAGCTACCTGACTCCATCGCAAGGGTGCTGAAATCG 1089 Query 24041 CAGCGCTTACGCAGGTGCGGCGGCAGATGGATTTCCAGAAAGTCCCGAGCGACCGCGATA 24100 ||||||| ||||| || || ||||||||||||||||||||||| || ||||||| |||| Sbjct 1090 CAGCGCTCCCGCAGATGAGGTGGCAGATGGATTTCCAGAAAGTCTCGGGCGACCGTGATA 1149 Query 24101 TCGCCAAGGAACTTTTTGAATACGTGGTCATGGTGCGACAG---GGATTTCGTCAT 24153 ||||| |||||| ||||||| | | |||||| || || || |||| | ||||| Sbjct 1150 TCGCCGAGGAAC-TTTTGAACAGGGAGTCATGTTGGGAGAGCGAGGATGTTGTCAT 1204 Score = 212 bits (234), Expect = 2e-50 Identities = 701/1079 (65%), Gaps = 16/1079 (1%) Strand=Plus/Plus Query 15402 ATGGCGTTTAGCCGCAACAGTCAGGCGGTGGTGG-CGGCAGGAAAAATGACGCTCTACCG 15460 |||||| |||||||||| |||||||||| | | |||| | | || || || | Sbjct 26129 ATGGCGCATAGCCGCAACTCTCAGGCGGTGATCGTCGGCGGTCAGGTTGT-GCAATATGG 26187 Query 15461 TTACGATGGCACGGTAAAAACACTGGAAAACTGGCCGAAAGAGAAAAAATACACGCAATA 15520 |||||||||||||| ||||| | | |||||||| | || |||||| || Sbjct 26188 CTACGATGGCACGGTGAAAACTGTTGCTAACTGGCCTGTATCGAGTGGCACCACGCAGTA 26247 Query 15521 CGACATCGGTAACGTGCGTGATATGTGCCATTTACGCGGACGTTATGTCTGGTGTAAAGA 15580 | | || ||||||||| ||| | |||||| || || |||| ||||| Sbjct 26248 TCAGCTGGGCTCATCGCGTGATATCTGCTGGTCACGCGGTAACTACGTGTGGTCGAAAGA 26307 Query 15581 CGGCAGCGATATTTTTGGCGTCACCGATTTAGAAGATGAATCTCACCCTGACCGCTACCG 15640 || | ||| ||| | || | ||||| || ||||| || || || ||||| Sbjct 26308 TGGGACTGATTCGTTTTTCATCTCTGATTTGGATGATGAGGCTTTTCCCGATAAATACCG 26367 Query 15641 CGCCCTGTATCGCGCCGAATCACAACCCGACGGCATTATCGGTATTGATAGCTGGCGCGA 15700 || || || || || |||||||| ||||||||||| ||| ||| | ||||| || Sbjct 26368 TGCTGAATACCGTGCGGAGTCACAACCAGACGGCATTATTGGTGTTGGTTCATGGCGTGA 26427 Query 15701 TTTTATTGTCTGCTTTGGCGCGTCCACCATTGAATATTTTTCCCTGACCGGGGCGGCCG- 15759 | | |||| ||||| ||| | |||| | ||| |||||||| ||||| || | | Sbjct 26428 TATGGTTGTGTGCTTCGGCACAACCACGACTGAGTATTTTTCTCTGACGGGTAACTCTGG 26487 Query 15760 -ACGGGCAATCCGCCATCTATGCCGCACAGCCTGCACTCATGGTCGAGAAAGGTATTGCC 15818 |||| | || || || ||| | || || ||||||| ||||| || || Sbjct 26488 TGCGGGTCAGGCGGTATACAT--CGCTAACCCGGCGTACATGGTCACAAAAGGGATAGCT 26545 Query 15819 GGGACCCACTGCAAGACCCGGCTCGGCGATGCCCATGTGATCATCAGCCATCAGGCCACC 15878 ||||| |||||| || | | || || | || |||||| | | ||| || Sbjct 26546 GGGACGTTTTGCAAGTGCCCGTTTATGGACGCATTCGCCATTATCAGCAACCCGGCAACA 26605 Query 15879 GGCGCGCCGTCGGTATTCCTGATT-AATCAGGCGCAGGCGACATCGATTGCCACGGCCAC 15937 ||||| ||||| || | ||||||| | || || ||||| | | | || || | || || Sbjct 26606 GGCGCACCGTCTGTCTACCTGATTGACTCTGG-TCAGGCCAAACCCATCGCATCAGCAAC 26664 Query 15938 CATCGAGAAAATTCTACGCAGCTACACGCACGATGAACTGGCGAGCGCCGTCATGGAAAC 15997 | ||||||| |||||| ||||| ||| ||| || | | | ||||||||| | Sbjct 26665 GACTGAGAAAACGCTACGCGAATACACTAACGCTGAGCTATCAACTGGCGTCATGGAGTC 26724 Query 15998 CGTCCGTTTCGACAGCCACGAATTAGTGCTTATCCATTTGTCGCGACAGGTG-TTGTGTT 16056 | ||||||||| |||||| | || ||||||| || | || || ||| | ||||| Sbjct 26725 ATTGCGTTTCGACTCTCACGAACTGCTGATTATCCACCTGCCACGTCATGTGCTGGTGTT 26784 Query 16057 ATGACGCCGCGGCCAACCAGAACGGGCTGCAATGGAGCCTGCTGAAAACGGGC---TTTT 16113 ||| | ||| | | ||| ||| | || ||| | | |||||||||||| ||| Sbjct 26785 -TGATTCGTCGGTGAGCGAGAGCGGTCCACAGTGGGCCATCCTGAAAACGGGCCTGTTTG 26843 Query 16114 ATCACGCTCCCTATCGCGGCATCGATTTTATGTTTGCCGACCATCACCTCACCTGTGGCG 16173 || ||| || || || || ||||| | | | | | |||| || || | Sbjct 26844 ATGACG---TGTACCGTGGGATTGATTTCTTCTACGAAGGCGGCGCTATCACATGCGGTG 26900 Query 16174 ATAAAAACGATTCCCTCCTCGGCCAACTTGATTTTGCCTCTTCTGCGCAATATGAAAAAC 16233 | || || || | ||| || ||| ||||||| || ||||| |||||||| |||| Sbjct 26901 ACAAGCTGGAATCTGTGACCGGACAGCTTAATTTTGCATCGTCTGCCCAATATGACAAAC 26960 Query 16234 CGCAGGAGCACGTTCTCTATACCCCGCTTTTCAAGGCAGATAATGCCCGCGTGTTTGATT 16293 ||||||||| | |||||| ||||||| ||||||| || || || | |||| || Sbjct 26961 AACAGGAGCACTTGCTCTATTCCCCGCTCATCAAGGCGGACAACGCGAGACTGTTCGACC 27020 Query 16294 TTGAACTGGAGGCATCAACCGGCGTGGCGCACATCGCCGACCGCCTCTTCCTCTCCGCCA 16353 | || || || | ||| || ||||| || || |||| || || || || |||| ||| Sbjct 27021 TCGAGCTTGAAGTATCGACGGGCGTTGCTCAATTCGCTGAACGGCTGTTTATCTCTACCA 27080 Query 16354 CCGCCGACGGTCTCCATTTTGGCCGTGAACAGATGATTAACCAAAACGCGCCGTTTGCGT 16413 || | || || || | | ||| | ||||| ||| | || || ||||| | Sbjct 27081 CCACTGATGGCATCAACTACGGCAGGGAACAAATGGTGCCGTGGAATGCACCGTTCCGCT 27140 Query 16414 ATGACCGGCGCATTCTCTGGCGGCGGATGGGTCGCGTCAGAAAAAATCTCGGTTTTAAG 16472 |||||| | | || ||||| ||||| || || || | ||||| |||| || ||| Sbjct 27141 ATGACCAGAGGGCGCTATGGCGTCGGATTGGGCGTGTGCGCAAAAACATCGGCTTCAAG 27199 Score = 154 bits (170), Expect = 5e-33 Identities = 149/191 (78%), Gaps = 3/191 (2%) Strand=Plus/Plus Query 23096 ACTGCGCCAGATATCGACTGGCTGGAGCCGCCCGACGCGGAAAAGGCGGGGGATTAATGC 23155 || ||||| ||||| || |||| ||| ||||| | | | ||| |||| | |||| || Sbjct 262 ACAGCGCCGGATATTGAATGGCCGGAAGCGCCCAAAGGTGGAAAAGCGGTGAATTAGTGT 321 Query 23156 CCGTCATCGAACAGGGAAGCCAGTTCGTCATCGGAAAGACCCGTCGACATTTTGACGATA 23215 | ||| |||| || ||||||||||| |||||||| || || ||||||||||| | Sbjct 322 CAGTCGTCGA---GGCTCGCCAGTTCGTCGTCGGAAAGGCCGGTTGACATTTTGACAAGG 378 Query 23216 GCGCGATCGACACCATTGGCGATAAGTTGCCTTGCAATTTTCAGCGAGGCGCTATGCTCG 23275 | ||| || || || ||||| | ||||||||||||||| || |||||||| ||||||||| Sbjct 379 GTGCGTTCAACGCCGTTGGCAAAAAGTTGCCTTGCAATGTTGAGCGAGGCACTATGCTCG 438 Query 23276 CCTTCTTGGCG 23286 ||||||||||| Sbjct 439 CCTTCTTGGCG 449 Score = 100 bits (110), Expect = 9e-17 Identities = 181/269 (67%), Gaps = 27/269 (10%) Strand=Plus/Plus Query 31620 ATGGGCCAAGTCGCATTTGATAC---GCAAGAGTTTGTAGAGATGCTGGAGAATGCAGGT 31676 |||||||| || ||||||||||| ||| | || | |||| | | | | || || Sbjct 8458 ATGGGCCAGGTTGCATTTGATACATTGCAGGCGTCAGAAGAGCTTC---AAACCGCCGGG 8514 Query 31677 TTGCCAAAAGACCAGGCGCGGGCGATTTCTATCGCCGTACGCAAGTCTCACGAGGTGGCG 31736 | | | || ||||| ||||||||| ||| ||||||||||||||| ||||||||| Sbjct 8515 CTTACCAGTGAGCAGGCCAAGGCGATTTCGCTCGTCGTACGCAAGTCTCATGAGGTGGCG 8574 Query 31737 GATGTGGCGACCCGACGTGACCTTGAGGATGCCAAGAAAGACATCGGGGCTAGATTCGAT 31796 |||||||| ||| ||||||||||| || | || || || | || | |||||| Sbjct 8575 GATGTGGCTACCAAGCGTGACCTTGACGACGTTCGTAAGGAAATTGACGCCCGCTTCGAT 8634 Query 31797 AAGGT---------------------CGATGCCCAGATAGCCGAAGTGCGCAAAGACCTG 31835 ||||| || || ||||||||||| || ||||| |||||| Sbjct 8635 AAGGTTGACGCACGCTTCGAGAAAACTGAGGCGCAGATAGCCGATGTCCGCAAGGACCTG 8694 Query 31836 TCCGCTGAAATCGCGGAAGCTCGCAAGGA 31864 ||||| || || || || | || ||||| Sbjct 8695 TCCGCAGAGATAGCCGATGTGCGTAAGGA 8723 Score = 93.3 bits (102), Expect = 1e-14 Identities = 125/169 (74%), Gaps = 9/169 (5%) Strand=Plus/Plus Query 2491 AAAACAGGAGAACCAGCCCATGGGCCAAGTCGCATTTGATAC---GCAAGAGTTCGTCGA 2547 || ||||||| | | || |||||||| || ||||||||||| ||| | || | || Sbjct 8440 AATACAGGAGGATCCGCT-ATGGGCCAGGTTGCATTTGATACATTGCAGGCGTCAGAAGA 8498 Query 2548 GACGCTGGAGAACGCCGGT-TTACCGAAAGACCAGGCGCGGGCGATTTCTATCGCTGTTC 2606 | || | | |||||| ||||| | || ||||| ||||||||| ||| || | Sbjct 8499 G---CTTCAAACCGCCGGGCTTACC-AGTGAGCAGGCCAAGGCGATTTCGCTCGTCGTAC 8554 Query 2607 GCAAGTCTCACGAGGTGGCGGATGTGGCGACCCGACGTGACCTTGAGGA 2655 |||||||||| ||||||||||||||||| ||| ||||||||||| || Sbjct 8555 GCAAGTCTCATGAGGTGGCGGATGTGGCTACCAAGCGTGACCTTGACGA 8603 >seq3708 Length=7132 Score = 179 bits (198), Expect = 1e-40 Identities = 169/215 (79%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 23942 CCCGTCGTGGTCTTCATCGAGTAGAGCATATCCGAGCACTGGCCCTTCAGGTCGTCTTCG 24001 ||||| | |||| || || |||||||||||||| |||||| ||||||||||||| Sbjct 1978 CCCGTTTTTGTCTGCACGGAATAGAGCATATCCGAACACTGGGTGCGCAGGTCGTCTTCG 1919 Query 24002 ATAAATGAGCCGGAAGCCATCGCCAATGTGCCGAAATCGCAGCGCTTACGCAGGTGCGGC 24061 ||||| || || ||||||| | |||| |||||||||||||| ||||| || | Sbjct 1918 ATAAAGCTACCTGACTCCATCGCAAGGGTGCTGAAATCGCAGCGCTCCCGCAGATGAGAT 1859 Query 24062 GGCAGATGGATTTCCAGAAAGTCCCGAGCGACCGCGATATCGCCAAGGAACTTTTTGAAT 24121 ||||||||||||||||||||||| || ||||||| ||||||||| |||||||||||||| Sbjct 1858 GGCAGATGGATTTCCAGAAAGTCTCGGGCGACCGTGATATCGCCGAGGAACTTTTTGAAC 1799 Query 24122 ACGTGGTCATGGTGCGACAG---GGATTTCGTCAT 24153 | | |||||| || || || |||| | ||||| Sbjct 1798 AGGGAGTCATGTTGGGAGAGTGAGGATGTTGTCAT 1764 Score = 109 bits (120), Expect = 2e-19 Identities = 140/192 (73%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 2491 AAAACAGGAGAACCAGCCCATGGGCCAAGTCGCATTTGATACGCAAGAGTTCGTCGAGAC 2550 || ||||||| | | || || ||| | || ||||||||||| ||||||||||| || || Sbjct 334 AACACAGGAGGATCCGCT-ATCGGCTAGGTTGCATTTGATACTCAAGAGTTCGTTGAAAC 276 Query 2551 GCTGGAGAACGCCGGTTTACCGAAAGACCAGGCGCGGGCGATTTCTATCGCTGTTCGCAA 2610 |||||| |||||||| || ||||||||||| || |||||| ||| | | ||| || || Sbjct 275 GCTGGAAAACGCCGGGTTGCCGAAAGACCAAGCCAAGGCGATATCTCTTGTTGTGCGAAA 216 Query 2611 GTCTCACGAGGTGGCGGATGTGGCGACCCGACGTGACCTTGAGGATGCCAAGAAAGATTT 2670 || ||||| || || || | || || || || || || |||| ||||| || Sbjct 215 ATCACACGAAGTAGCAGACCTTGCTACAAAGCGCGATCTCGACGATGTGCGCAAAGACTT 156 Query 2671 GGCCGCAGAAAT 2682 | |||| || || Sbjct 155 GTCCGCTGATAT 144 Score = 89.7 bits (98), Expect = 2e-13 Identities = 171/247 (69%), Gaps = 4/247 (2%) Strand=Plus/Minus Query 31620 ATGGGCCAAGTCGCATTTGATACGCAAGAGTTTGTAGAGATGCTGGAGAATGCAGGTTTG 31679 || ||| | || ||||||||||| |||||||| || || | |||||| || || || ||| Sbjct 316 ATCGGCTAGGTTGCATTTGATACTCAAGAGTTCGTTGAAACGCTGGAAAACGCCGGGTTG 257 Query 31680 CCAAAAGACCAGGCGCGGGCGATTTCTATCGCCGTACGCAAGTCTCACGAGGTGGCGGAT 31739 || |||||||| || |||||| ||| | | || || || || ||||| || || || Sbjct 256 CCGAAAGACCAAGCCAAGGCGATATCTCTTGTTGTGCGAAAATCACACGAAGTAGCAGAC 197 Query 31740 GTGGCGACCCGACGTGACCTTGAGGATGCCAAGAAAGACATCGGGGCTAGAT-TCGATAA 31798 | || || || || || || |||| |||||| | ||| ||| ||| | Sbjct 196 CTTGCTACAAAGCGCGATCTCGACGATGTGCGCAAAGACTTGTCCGCT-GATATCGCCGA 138 Query 31799 GGTCGATGC-CCAGATAGCCGAAGTGCGCAAAGACCTGTCCGCTGAAATCGCGGAAGCTC 31857 || || || |||||||||| || || || ||||| ||||| || || || || | | Sbjct 137 AGT-GAAGCGTGAGATAGCCGATGTACGTAAGGACCTATCCGCAGAGATTGCCGATGTCC 79 Query 31858 GCAAGGA 31864 | ||||| Sbjct 78 GTAAGGA 72 >seq2617 Length=13952 Score = 109 bits (120), Expect = 2e-19 Identities = 110/142 (77%), Gaps = 6/142 (4%) Strand=Plus/Minus Query 31609 GAGGGTTCCACATGGGCCAAGTCGCATTTGATAC---GCAAGAGTTTGTAGAGATGCTGG 31665 |||| || | |||||||||||| ||||||||||| ||| | | | |||| || | Sbjct 800 GAGGATTTCCCATGGGCCAAGTTGCATTTGATACATTGCAGGCATCGGAAGAG---CTTG 744 Query 31666 AGAATGCAGGTTTGCCAAAAGACCAGGCGCGGGCGATTTCTATCGCCGTACGCAAGTCTC 31725 ||| ||| || | | | ||| |||||||||||||| || ||| |||||||||||||| Sbjct 743 AGACTGCTGGCATTTCCAGAGAGCAGGCGCGGGCGATCTCGCTCGTCGTACGCAAGTCTC 684 Query 31726 ACGAGGTGGCGGATGTGGCGAC 31747 | ||||||||||||||||| || Sbjct 683 ATGAGGTGGCGGATGTGGCTAC 662 Score = 93.3 bits (102), Expect = 1e-14 Identities = 104/136 (76%), Gaps = 10/136 (7%) Strand=Plus/Minus Query 2507 CCCATGGGCCAAGTCGCATTTGATAC---GCAAGAGTTCGTCG--AGACGCTGGAGAACG 2561 |||||||||||||| ||||||||||| ||| | | ||| ||| ||| |||| | Sbjct 792 CCCATGGGCCAAGTTGCATTTGATACATTGCAGG----CATCGGAAGA-GCTTGAGACTG 738 Query 2562 CCGGTTTACCGAAAGACCAGGCGCGGGCGATTTCTATCGCTGTTCGCAAGTCTCACGAGG 2621 | || | | | ||| |||||||||||||| || ||| || ||||||||||| |||| Sbjct 737 CTGGCATTTCCAGAGAGCAGGCGCGGGCGATCTCGCTCGTCGTACGCAAGTCTCATGAGG 678 Query 2622 TGGCGGATGTGGCGAC 2637 ||||||||||||| || Sbjct 677 TGGCGGATGTGGCTAC 662 >seq1577 Length=31499 Score = 109 bits (120), Expect = 2e-19 Identities = 110/142 (77%), Gaps = 6/142 (4%) Strand=Plus/Plus Query 31609 GAGGGTTCCACATGGGCCAAGTCGCATTTGATAC---GCAAGAGTTTGTAGAGATGCTGG 31665 |||| || | |||||||||||| ||||||||||| ||| | | | |||| || | Sbjct 20721 GAGGATTTCCCATGGGCCAAGTTGCATTTGATACATTGCAGGCATCGGAAGAG---CTTG 20777 Query 31666 AGAATGCAGGTTTGCCAAAAGACCAGGCGCGGGCGATTTCTATCGCCGTACGCAAGTCTC 31725 ||| ||| || | | | ||| |||||||||||||| || ||| |||||||||||||| Sbjct 20778 AGACTGCTGGCATTTCCAGAGAGCAGGCGCGGGCGATCTCGCTCGTCGTACGCAAGTCTC 20837 Query 31726 ACGAGGTGGCGGATGTGGCGAC 31747 | ||||||||||||||||| || Sbjct 20838 ATGAGGTGGCGGATGTGGCTAC 20859 Score = 93.3 bits (102), Expect = 1e-14 Identities = 104/136 (76%), Gaps = 10/136 (7%) Strand=Plus/Plus Query 2507 CCCATGGGCCAAGTCGCATTTGATAC---GCAAGAGTTCGTCG--AGACGCTGGAGAACG 2561 |||||||||||||| ||||||||||| ||| | | ||| ||| ||| |||| | Sbjct 20729 CCCATGGGCCAAGTTGCATTTGATACATTGCAGG----CATCGGAAGA-GCTTGAGACTG 20783 Query 2562 CCGGTTTACCGAAAGACCAGGCGCGGGCGATTTCTATCGCTGTTCGCAAGTCTCACGAGG 2621 | || | | | ||| |||||||||||||| || ||| || ||||||||||| |||| Sbjct 20784 CTGGCATTTCCAGAGAGCAGGCGCGGGCGATCTCGCTCGTCGTACGCAAGTCTCATGAGG 20843 Query 2622 TGGCGGATGTGGCGAC 2637 ||||||||||||| || Sbjct 20844 TGGCGGATGTGGCTAC 20859 >seq2784 Length=12453 Score = 100 bits (110), Expect = 9e-17 Identities = 181/269 (67%), Gaps = 27/269 (10%) Strand=Plus/Minus Query 31620 ATGGGCCAAGTCGCATTTGATAC---GCAAGAGTTTGTAGAGATGCTGGAGAATGCAGGT 31676 |||||||| || ||||||||||| ||| | || | |||| | | | | || || Sbjct 10944 ATGGGCCAGGTTGCATTTGATACATTGCAGGCGTCAGAAGAGCTTC---AAACCGCCGGG 10888 Query 31677 TTGCCAAAAGACCAGGCGCGGGCGATTTCTATCGCCGTACGCAAGTCTCACGAGGTGGCG 31736 | | | || ||||| ||||||||| ||| ||||||||||||||| ||||||||| Sbjct 10887 CTTACCAGTGAGCAGGCCAAGGCGATTTCGCTCGTCGTACGCAAGTCTCATGAGGTGGCG 10828 Query 31737 GATGTGGCGACCCGACGTGACCTTGAGGATGCCAAGAAAGACATCGGGGCTAGATTCGAT 31796 |||||||| ||| ||||||||||| || | || || || | || | |||||| Sbjct 10827 GATGTGGCTACCAAGCGTGACCTTGACGACGTTCGTAAGGAAATTGACGCCCGCTTCGAT 10768 Query 31797 AAGGT---------------------CGATGCCCAGATAGCCGAAGTGCGCAAAGACCTG 31835 ||||| || || ||||||||||| || ||||| |||||| Sbjct 10767 AAGGTTGACGCACGCTTCGAGAAAACTGAGGCGCAGATAGCCGATGTCCGCAAGGACCTG 10708 Query 31836 TCCGCTGAAATCGCGGAAGCTCGCAAGGA 31864 ||||| || || || || | || ||||| Sbjct 10707 TCCGCAGAGATAGCCGATGTGCGTAAGGA 10679 Score = 93.3 bits (102), Expect = 1e-14 Identities = 125/169 (74%), Gaps = 9/169 (5%) Strand=Plus/Minus Query 2491 AAAACAGGAGAACCAGCCCATGGGCCAAGTCGCATTTGATAC---GCAAGAGTTCGTCGA 2547 || ||||||| | | || |||||||| || ||||||||||| ||| | || | || Sbjct 10962 AATACAGGAGGATCCGCT-ATGGGCCAGGTTGCATTTGATACATTGCAGGCGTCAGAAGA 10904 Query 2548 GACGCTGGAGAACGCCGGT-TTACCGAAAGACCAGGCGCGGGCGATTTCTATCGCTGTTC 2606 | || | | |||||| ||||| | || ||||| ||||||||| ||| || | Sbjct 10903 G---CTTCAAACCGCCGGGCTTACC-AGTGAGCAGGCCAAGGCGATTTCGCTCGTCGTAC 10848 Query 2607 GCAAGTCTCACGAGGTGGCGGATGTGGCGACCCGACGTGACCTTGAGGA 2655 |||||||||| ||||||||||||||||| ||| ||||||||||| || Sbjct 10847 GCAAGTCTCATGAGGTGGCGGATGTGGCTACCAAGCGTGACCTTGACGA 10799 >seq6242 Length=2873 Score = 91.5 bits (100), Expect = 5e-14 Identities = 120/165 (73%), Gaps = 1/165 (1%) Strand=Plus/Plus Query 2491 AAAACAGGAGAACCAGCCCATGGGCCAAGTCGCATTTGATACGCAAGAGTTCGTCGAGAC 2550 || ||||||| | | || ||||||||||| ||||||||||| |||||||||||||| | Sbjct 1820 AACACAGGAGGATCCGCT-ATGGGCCAAGTTGCATTTGATACTCAAGAGTTCGTCGAAAA 1878 Query 2551 GCTGGAGAACGCCGGTTTACCGAAAGACCAGGCGCGGGCGATTTCTATCGCTGTTCGCAA 2610 |||||||| | | ||| | | ||| ||||| ||| || | | | || || | Sbjct 1879 GCTGGAGAGCTCTGGTCTTAATAGAGAGCAGGCCAAGGCTATAACCCTTGTCGTGCGTCA 1938 Query 2611 GTCTCACGAGGTGGCGGATGTGGCGACCCGACGTGACCTTGAGGA 2655 || || ||||| || ||| | || ||| ||| ||||||||||| Sbjct 1939 ATCCCATGAGGTCGCAGATCTTGCTACCAAACGCGACCTTGAGGA 1983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166764044965656