Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq3504 136 1e-27 >seq3504 Length=7869 Score = 136 bits (150), Expect = 1e-27 Identities = 215/306 (70%), Gaps = 4/306 (1%) Strand=Plus/Plus Query 37651 AATGAAACAATATTTAGACTTGCTGCAAGACATCTTAGAAAACGG--CGTCGAAAAAGAA 37708 ||||||||| ||| | || ||| |||| | | | || | || || |||| | | Sbjct 7445 AATGAAACAGTATCTGGAATTGATGCAGAAAGTGCTTGATGAGGGAACGCCGAAG--GGA 7502 Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAA 37768 ||| |||| ||| ||| || | ||| | ||||||| |||| | || ||||| | ||| Sbjct 7503 GACAGAACCGGCACCGGAACCTTATCGATTTTCGGCCACCAGATGCGTTTCAATCTGCAA 7562 Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828 || || |||||||| ||||| || || | ||| | ||||| |||||| | || ||| Sbjct 7563 GACGGTTTTCCGCTGGTGACCACCAAGCGCTGCCATCTGCGCTCAATCATTCACGAGCTG 7622 Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATT 37888 | ||||| | || || || || ||||| ||||| |||| || ||| || | ||| Sbjct 7623 TTGTGGTTCCTCAACGGTGACACCAACGTTGGCTATCTGCACGACAATAAAGTTAGCATT 7682 Query 37889 TGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGC 37948 |||||||| ||||| || || || |||||||| || ||| | ||||| ||| |||||| Sbjct 7683 TGGGATGAATGGGCCGATGAGAATGGCGATCTTGGGCCGGTATACGGTAAGCAGTGGCGC 7742 Query 37949 TCGTGG 37954 | ||| Sbjct 7743 GCTTGG 7748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130614345325050