Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq33 127 2e-24
>seq33
Length=2490231
Score = 127 bits (140), Expect = 2e-24
Identities = 145/192 (76%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 61186 GAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAAT 61245
||| ||||||| ||| ||||| ||||| |||||||| || || || || || || |||
Sbjct 181503 GAAAAACATTTTATTTCTCATGTATTGGCTTTCTTTGCTGCCTCTGATGGAATTGTTAAT 181562
Query 61246 GAGAATTTATTGGA-ACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTA 61304
|| || ||| | || | |||| | || || || ||||| | || || | ||||| ||
Sbjct 181563 GAAAACTTAGTTGAGAGGTTTAGT-CAAGAAGTTCAAGTAACTGAAGCAAGATGTTTTTA 181621
Query 61305 CGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATAC 61364
||| ||||| ||||| ||||| ||||| ||||| |||||||||||| | ||||| |||||
Sbjct 181622 CGGTTTCCAAATTGCAATGGAAAATGTTCACTCTGAGATGTACAGTTTACTCATAGATAC 181681
Query 61365 GTACATCAGGGA 61376
|| || ||||
Sbjct 181682 TTATATTCGGGA 181693
Score = 98.7 bits (108), Expect = 8e-16
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 61426 GTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGT 61485
|||||| ||||| || ||||| || | |||||| || || || || || ||||
Sbjct 182458 GTGAAGAAAAAAGCTGACTGGGCTTTGGAATGGATCTCCTCTAAGACTGCCACTTTTGCA 182517
Query 61486 GAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCA 61545
||| || | | || ||||| | || || || ||||||||| ||| ||||| ||
Sbjct 182518 GAAAGAATTATTGCTTTTGCTGCTGTGGAAGGCGTATTTTTCTCTGGTAGCTTTGCGGCT 182577
Query 61546 ATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATA 61605
|| |||||||| |||||| | ||| | ||||| || || || ||||||||||| |||||
Sbjct 182578 ATATTTTGGTTAAAGAAAAGAGGATTAATGCCAGGGCTTACTTTCAGCAATGAATTGATT 182637
Query 61606 TC 61607
||
Sbjct 182638 TC 182639
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397487872281680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |