Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_031940.1 Length=77375 Score E Sequences producing significant alignments: (Bits) Value seq2192 140 2e-28 >seq2192 Length=16777 Score = 140 bits (154), Expect = 2e-28 Identities = 378/564 (67%), Gaps = 26/564 (5%) Strand=Plus/Minus Query 28042 GGTGCCGGGATTGGCGTCCTGGAATTGTTATCGGCGACA-AATGACGCGCCT---GCGTC 28097 ||||||||| || || || | | || ||| ||||| |||||| |||| |||| Sbjct 16185 GGTGCCGGGCTTTGCACCCCGTAGGGATTGTCG-CGACAGAATGACACGCCGCGAGCGTG 16127 Query 28098 TTTTTTATTGTCGCAGCTCGGCTATATCCAAATTATGGTGGGCTGGGTAGGGGCACCGAA 28157 |||||| ||||||| || ||| ||| |||||||||| ||||| |||||| Sbjct 16126 TTTTTTTATGTCGCAATCTAGCCGCATCTCAAT---GGTGGGCTGGATAGGGCTACCGAA 16070 Query 28158 AGGTGCGCCGGTTTCCGATAACGCCGGTTACGCCAACCCTGCTCAGTTCACCACCAGT-- 28215 |||| ||||| | || || ||||| || ||||||| |||||||||||||| | Sbjct 16069 AGGTAGGCCGGAT---GACAATCCCGGTAGTGCAAACCCTGTTCAGTTCACCACCAATAT 16013 Query 28216 GAAATTGGCGTTTCCGGTGGTGGAG-TCACATCCAAGTTATCGGAGGCGGCCATCATGGC 28274 || || || || |||||| | | | || || || || || || ||| ||| Sbjct 16012 GAGTTTTGCACCTCT--TGGTGGTGATTAAATTCAGATTGTCACCGGAGGTCATTATG-- 15957 Query 28275 TACAGTCCCAACT---CTCGCTCAACCTGAAATCAGTGTTATTAACGGGCAAGCCGTTAC 28331 ||| | | ||| || ||| ||| || ||| | | || || |||| || || Sbjct 15956 -ACACTTCAAACAAGCCTTGCTGCACCCAAAGTCACTATCCGCAATGGTAAAGCTGTAAC 15898 Query 28332 TTCTTCCCTTGCTGTTGCCGACTACTTCACCAAACGTCATGACGATGTTCTGAAAAAGAT 28391 | | || | | ||||| || ||||| ||| ||||| || | || | | || Sbjct 15897 TACATCATTGGACGTTGCTGATTACTTTGACAAGCGTCACGATAACGTATTACGCACCAT 15838 Query 28392 CCG-CGCACTTGATTGCTCTCCTGAGTTTACTGCCCGCAATTTTGCGGTGAGTGATTACA 28450 ||| |||||||||||| | |||||||||| |||||||| ||||||||| |||| Sbjct 15837 TGAACGC-CTTGATTGCTCTGAAAAATTTACTGCCCTCAATTTTGAGGTGAGTGAATACA 15779 Query 28451 CCGAC-GCATCTGGCCGCAAACTACCTTGCTATCAAATAACCCGCGACGGCTTTGCTTTC 28509 ||||| ||| | |||||||||||||| ||| |||||| |||||||| ||| Sbjct 15778 CCGACAGCA-CAGGCCGCAAACTACCGATGTATACCATAACCAAGGACGGCTTCATTTTT 15720 Query 28510 CTTGCTATGGGTTTCACGGGTAAACGTGCTGCCCAGTTCAAAGAGGCATACATCAATGCC 28569 || | ||||| ||||| || ||| || || |||||| || || ||||| | Sbjct 15719 CTCGTCATGGGCTTCACCGGCAAAAAAGCAGCAGCGTTCAAGGAAGCTTACATTGCGGAG 15660 Query 28570 TTTAACCAGATGGAGAAACAGCTT 28593 ||||||| ||||| | |||||| Sbjct 15659 TTTAACCGCATGGAAGAGCAGCTT 15636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247425322688152