Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_032139.1 Length=1743 Score E Sequences producing significant alignments: (Bits) Value seq1834 78.8 1e-11 >seq1834 Length=25486 Score = 78.8 bits (86), Expect = 1e-11 Identities = 166/244 (68%), Gaps = 3/244 (1%) Strand=Plus/Minus Query 545 AAAGATCAGAGCAGTGTGGGGTACCCCCACTGATGTAATTGCTGAAGAGGCACGATTTTT 604 |||| || ||||||| |||||| ||| | ||||| || | ||||| | |||| ||| Sbjct 14515 AAAGTTC-GAGCAGTTTGGGGTTACCCAATAGATGTTATCGTCGAAGACGGTCGATCTTT 14457 Query 605 CCTTCCTTATATGGCTAAGCTGAAACTATCTGATGCACCTATTGCGTACCGAGCCGAAAT 664 | || ||| | | ||| || | | || ||||| | || | | ||| | Sbjct 14456 CTACCCATATTTATCATGGCTCAAGAAAACGTCAGCTCCTATAGGATATTGTGTTGAAGT 14397 Query 665 GGCTACCGGAGGTATGTCACTAATTAATGACATG-TGCCAGTCACACCCGGGTGCTAAAT 723 ||||| |||||||||||| |||||||| ||| || ||| |||| |||| ||| |||| Sbjct 14396 AGCTACTGGAGGTATGTCATATATTAATGATATGTTGACAG-CACATCCGGATGCAAAAT 14338 Query 724 ATTTAATGACTGATTTGTCACAGTTCGACAAGAGCGTACCGCCATGGTTAATTCGCGATG 783 | || || ||||||| | || || || | || || || |||||||| || |||| Sbjct 14337 ACTTGATTACTGATTGGAGCTGCTTTGATAAAACGGTGCCACCTTGGTTAATACGTGATG 14278 Query 784 CGTT 787 | || Sbjct 14277 CTTT 14274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5467839101078