Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophagidae_20sp._20BV-2014_20[genbank_20GCA_5F001047195.1_202015- 07-06] 287,425 sequences; 494,580,772 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq200556 73.4 6e-11 >seq200556 Length=1340 Score = 73.4 bits (80), Expect = 6e-11 Identities = 111/151 (74%), Gaps = 8/151 (5%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||| ||| Sbjct 1070 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAA-TTC 1013 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCA-AAGA 117 | ||| | | |||| || || | | ||||| | || || || | |||| | Sbjct 1012 CAAGTTCATG-TGAACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 956 Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGAC 148 |||||||||||| |||| | ||| ||| || Sbjct 955 TTACCCGGACCTCTCGGTCTAGGAAATACAC 925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 749906108875