Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophagidae_20sp._20BV-2014_20[genbank_20GCA_5F001047195.1_202015- 07-06] 287,425 sequences; 494,580,772 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1329 111 5e-22 seq2414 82.4 2e-13 seq133293 75.2 3e-11 >seq1329 Length=1191 Score = 111 bits (122), Expect = 5e-22 Identities = 133/181 (73%), Gaps = 15/181 (8%) Strand=Plus/Plus Query 75 TGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTC 134 |||||||||| ||||||||||| |||| || |||||||||| ||| | |||| Sbjct 376 TGGGTAATTTACGCGCCTGCTGTCTTCGTT---------AGCCGTTTCTTAGGTTTCCTC 426 Query 135 TCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTAC 194 | ||||||||||||| | ||| ||||||||||| | ||| |||| || || |||| Sbjct 427 -CAGGAATCGAACCCTGAATCCTCGTTACCCGTTACAAACATAGTAGACCTAGATACTAC 485 Query 195 CATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGAT 254 |||| |||||| |||||| ||||||| || | ||| ||| | || ||| |||| Sbjct 486 CATCAAAAGTT-----GGCAGACATTTGAAAGATCTGTCGTCGGTACGAGAGCATACGAT 540 Query 255 T 255 | Sbjct 541 T 541 >seq2414 Length=2904 Score = 82.4 bits (90), Expect = 2e-13 Identities = 94/124 (76%), Gaps = 3/124 (2%) Strand=Plus/Minus Query 2 TACTCATTCCAATTACAAGACC--CAAAA-GAGCCCTGTATCAGTATTTATTGTCACTAC 58 |||||||||| | |||| | | ||| | ||| ||||||| |||| |||||||||| Sbjct 2522 TACTCATTCCTAATACAGGGCATTCAATATGAGTCCTGTATTTTAATTTTTTGTCACTAC 2463 Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 ||| ||| | ||| ||| |||| || | ||||||||||||| |||||||||||| Sbjct 2462 CTCTCCGAGCTGGGGGAGGGGGATTTACGTGACTGCTGCCTTCCTCAGATGTGGTAGCCA 2403 Query 119 TTTC 122 |||| Sbjct 2402 TTTC 2399 >seq133293 Length=2091 Score = 75.2 bits (82), Expect = 3e-11 Identities = 89/119 (75%), Gaps = 5/119 (4%) Strand=Plus/Minus Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||||||||||||||||||| ||||||| |||||| || | | |||||||| Sbjct 873 TTCTCAGGCTCCCTCTCCGGAATC----CCTAATTAGCCGTTATCCTGTTA-ACCATGGT 819 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 | |||| ||| ||||||||||||| ||| ||||||| || | ||| ||| Sbjct 818 TTTGTTAGAAACTACTATCAAAAGTTGATAGGGAAGACATTTGAAAGATCTGTCGTCGG 760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1506058732800