Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophagidae_20sp._20BV-2014_20[genbank_20GCA_5F001047195.1_202015- 07-06] 287,425 sequences; 494,580,772 total letters Query= NC_033851.1 Length=1869 Score E Sequences producing significant alignments: (Bits) Value seq5544 89.7 6e-15 >seq5544 Length=2540 Score = 89.7 bits (98), Expect = 6e-15 Identities = 122/164 (74%), Gaps = 5/164 (3%) Strand=Plus/Minus Query 808 ATACCGCCTATGGCATGGAAATGATGAAAGGAGGAATGACTTGGCTGAACGGACAAGCGA 867 ||||||||||||| ||||||||||||||||| |||||| ||| | ||| || || | Sbjct 1228 ATACCGCCTATGGAATGGAAATGATGAAAGGTGGAATGGAATGGTTAAACCAAC-AGTGT 1170 Query 868 TGA-TTGCGAATGCAAG-ACAACCTGGAGTCAAGTATCTTATGACTGACTTTTCAGGATT 925 | | || || || | | | || |||| ||||| | | ||||| |||| |||| || Sbjct 1169 TTACAAGCTAA-ACACGAAGACCCCGGAGCCAAGTTTTTGATGACGGACTATTCATCCTT 1111 Query 926 TGATAAGTCACTTCCCGCTTGGTTAATCCGTGATATATTTAAAA 969 |||| ||| |||| |||||||||||||| ||| | ||| ||| Sbjct 1110 CGATAGTTCAGTTCCAGCTTGGTTAATCCGAGAT-TGTTTCAAA 1068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5854067554250