Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcoptes_20scabiei_20[genbank_20GCA_5F000828355.1_202015-02-10] 18,860 sequences; 56,262,437 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq11380 269 7e-70 >seq11380 Length=2504 Score = 269 bits (298), Expect = 7e-70 Identities = 314/420 (75%), Gaps = 8/420 (2%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 ||||||| || | | ||||||| | | | || ||| |||||||| | ||||| Sbjct 1032 GCATCTTTACTCGTACTGCAATTTCGCCGGGCCTGTGGTTGAGACAGCAGGGAAGTCGTT 1091 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1092 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 1151 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCG--CGTTAG---CTAACC 187 | ||||| ||||||||||| ||||||| || |||||| | || ||||| Sbjct 1152 TAGTTACCACCGCCGTTTACTGGGGCTTAAATTCTCCGCTTCGACCACAAGGGTCTAACA 1211 Query 188 CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGT 246 | |||||||||| ||||||||||||||||| || ||||| || |||| | || | Sbjct 1212 GGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCT 1271 Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATG 306 | ||| | ||||||||||| ||||||||||| | || | ||| ||||| || Sbjct 1272 TCGCACGGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACC 1331 Query 307 AGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCT 366 |||| | | | |||| ||||| || || | ||||||||||||||||||| | | Sbjct 1332 AGCTCAA--AACCAGTCTGTCACCAGCAGTGGTCCCCCTTCTCCCGAAGTTACGGGGGCA 1389 Query 367 TTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 ||||||| |||||||| || ||||| | | | |||||| |||||||||||| ||||| Sbjct 1390 TTTTGCCGAGTTCCTTAACCACAGTTCACCCGATCGCCTTAGTATTCTCTACCTGACCAC 1449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260562213120