Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcoptes_20scabiei_20[genbank_20GCA_5F000828355.1_202015-02-10] 18,860 sequences; 56,262,437 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq11380 315 2e-83 >seq11380 Length=2504 Score = 315 bits (348), Expect = 2e-83 Identities = 300/385 (78%), Gaps = 29/385 (8%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||||| || | | | ||||||| ||| | || | |||||||||| || ||||| Sbjct 1032 GCATCTTTACTCGTACTGCAATTTCGCCGGGCCTGTGGTTGAGACAGCAGGGAAGTCGTT 1091 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1092 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 1151 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCG-----ATTGCTCTAACA 181 ||||||| ||||||||||||||||||||| ||| | |||||| | | ||||||| Sbjct 1152 TAGTTACCACCGCCGTTTACTGGGGCTTAAATTCTCCGCTTCGACCACAAGGGTCTAACA 1211 Query 182 GATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTT-GCGACT 240 | ||| |||||||||||||||||||||||||||||| | ||||||||| ||| || || Sbjct 1212 GGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCT 1271 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG--------- 291 | ||| |||||||||||| |||||||||||||| |||||||||||| Sbjct 1272 TCGCACGGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACC 1331 Query 292 ------------GCCTGTCA-TAG-ACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATT 337 | |||||| || | || ||||||||||| ||||||||||| |||| Sbjct 1332 AGCTCAAAACCAGTCTGTCACCAGCAGTGGTCCCCCTTCTCCCGAAGTTACGGGGGCATT 1391 Query 338 TTGCCGAGTTCCTTAACAATAGTTC 362 ||||||||||||||||| | ||||| Sbjct 1392 TTGCCGAGTTCCTTAACCACAGTTC 1416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062199631360