Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq14203 271 1e-70
seq8736 269 5e-70
seq5493 196 8e-48
>seq14203
Length=11121
Score = 271 bits (300), Expect = 1e-70
Identities = 209/244 (86%), Gaps = 3/244 (1%)
Strand=Plus/Plus
Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89
||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 83 GTCATTAGTAGGGTAAAACTAACCTGTCTCACGGCGGTCTAAACCCAGCTCACGTTCCCT 142
Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
| ||| |||| |||||||||||| ||||| |||||| ||||||||||||||||
Sbjct 143 TGCATTGG-TGAATAATCCAACGCTTGGCGAATATTGCTTCACAATGATAGGAAGAGCCG 201
Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209
|||||||||||||| ||| | ||||||||||||||||||||| |||||||||||||||||
Sbjct 202 ACATCGAAGGATCATAAAACGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATC 261
Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGAC-TAAAGGATCGATA 268
||| |||||||||||||| ||||||| | | ||| || || ||||||||||||
Sbjct 262 CCTATGGTAACTTTTCTGACACCTCTTG-TTAAAAACTCTTTAAACAAAAAGGATCGATA 320
Query 269 GGCC 272
||||
Sbjct 321 GGCC 324
>seq8736
Length=28011
Score = 269 bits (298), Expect = 5e-70
Identities = 184/206 (89%), Gaps = 1/206 (0%)
Strand=Plus/Minus
Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89
||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct 891 GTCATTAGTGGGGTAAATCTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 832
Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||
Sbjct 831 TGCA-TGGGTGAACAATCCAACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCG 773
Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209
|||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct 772 ACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCTGCCACAAGTCAGTTATT 713
Query 210 CCTGTGGTAACTTTTCTGGCACCTCT 235
| | | ||||||||||||||| ||||
Sbjct 712 CTTATAGTAACTTTTCTGGCATCTCT 687
Score = 255 bits (282), Expect = 1e-65
Identities = 181/206 (88%), Gaps = 1/206 (0%)
Strand=Plus/Minus
Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89
||||| ||| ||||||| ||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 580 GTCATTAGTGGGGTAAATCTAACTTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 521
Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
| |||||||||||||||||| || ||||| |||||| || |||||||||||||
Sbjct 520 TGCA-TGGGTGAACAATCCAACGTTTGGTGAATTTTGCTTCCCAATAATAGGAAGAGCCG 462
Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209
|||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct 461 ACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCTGCCACAAGTCAGTTATT 402
Query 210 CCTGTGGTAACTTTTCTGGCACCTCT 235
| | | ||||||||||||||| ||||
Sbjct 401 CTTATAGTAACTTTTCTGGCATCTCT 376
>seq5493
Length=3029
Score = 196 bits (216), Expect = 8e-48
Identities = 136/153 (89%), Gaps = 1/153 (1%)
Strand=Plus/Plus
Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 265 GTCATTAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 324
Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
| ||||||||||||||||||||| ||||| |||||| ||||||| ||||||||
Sbjct 325 TGCA-TGGGTGAACAATCCAACGCTTGGTGAATTTTGCTTCACAATGATAGAAAGAGCCG 383
Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGA 182
| |||||||||| ||||||| ||||||||||||
Sbjct 384 AAATCGAAGGATAAAAAAGCGACGTCGCTATGA 416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854107795200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |