Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq14203 271 1e-70 seq8736 269 5e-70 seq5493 196 8e-48 >seq14203 Length=11121 Score = 271 bits (300), Expect = 1e-70 Identities = 209/244 (86%), Gaps = 3/244 (1%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct 83 GTCATTAGTAGGGTAAAACTAACCTGTCTCACGGCGGTCTAAACCCAGCTCACGTTCCCT 142 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | ||| |||| |||||||||||| ||||| |||||| |||||||||||||||| Sbjct 143 TGCATTGG-TGAATAATCCAACGCTTGGCGAATATTGCTTCACAATGATAGGAAGAGCCG 201 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||| ||| | ||||||||||||||||||||| ||||||||||||||||| Sbjct 202 ACATCGAAGGATCATAAAACGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATC 261 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGAC-TAAAGGATCGATA 268 ||| |||||||||||||| ||||||| | | ||| || || |||||||||||| Sbjct 262 CCTATGGTAACTTTTCTGACACCTCTTG-TTAAAAACTCTTTAAACAAAAAGGATCGATA 320 Query 269 GGCC 272 |||| Sbjct 321 GGCC 324 >seq8736 Length=28011 Score = 269 bits (298), Expect = 5e-70 Identities = 184/206 (89%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||| ||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct 891 GTCATTAGTGGGGTAAATCTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 832 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | ||||||||||||||||||||| ||||| |||||| |||||||||||||||| Sbjct 831 TGCA-TGGGTGAACAATCCAACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCG 773 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct 772 ACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCTGCCACAAGTCAGTTATT 713 Query 210 CCTGTGGTAACTTTTCTGGCACCTCT 235 | | | ||||||||||||||| |||| Sbjct 712 CTTATAGTAACTTTTCTGGCATCTCT 687 Score = 255 bits (282), Expect = 1e-65 Identities = 181/206 (88%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||| ||| ||||||| ||||| ||||||| |||||||||||||||||||||||||||| Sbjct 580 GTCATTAGTGGGGTAAATCTAACTTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 521 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | |||||||||||||||||| || ||||| |||||| || ||||||||||||| Sbjct 520 TGCA-TGGGTGAACAATCCAACGTTTGGTGAATTTTGCTTCCCAATAATAGGAAGAGCCG 462 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct 461 ACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCTGCCACAAGTCAGTTATT 402 Query 210 CCTGTGGTAACTTTTCTGGCACCTCT 235 | | | ||||||||||||||| |||| Sbjct 401 CTTATAGTAACTTTTCTGGCATCTCT 376 >seq5493 Length=3029 Score = 196 bits (216), Expect = 8e-48 Identities = 136/153 (89%), Gaps = 1/153 (1%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 265 GTCATTAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 324 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | ||||||||||||||||||||| ||||| |||||| ||||||| |||||||| Sbjct 325 TGCA-TGGGTGAACAATCCAACGCTTGGTGAATTTTGCTTCACAATGATAGAAAGAGCCG 383 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGA 182 | |||||||||| ||||||| |||||||||||| Sbjct 384 AAATCGAAGGATAAAAAAGCGACGTCGCTATGA 416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854107795200