Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq5493 201 4e-49 seq14203 111 5e-22 seq26546 80.6 9e-13 >seq5493 Length=3029 Score = 201 bits (222), Expect = 4e-49 Identities = 137/154 (89%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 || ||||||||||||||| |||||| ||||||||| || ||| ||||||| ||||||| Sbjct 1479 GATTAGAGTCAAGCTCAAAAGGGTCCTCTTTCCCCACTAATTATTCCAAGCCGGTTCCCT 1538 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 |||||||| ||||||||||||||| ||||||| ||| | ||||||||||| ||||||||| Sbjct 1539 TGGCTGTGTTTTCGCTAGATAGTACATAGGGAGAGTAGAAATCTCGTTAACCCATTCATG 1598 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||| ||||||||||||||||||||| ||||||| Sbjct 1599 CGCGACACTAATTAGATGACGAGGCAGTTGGCTA 1632 Score = 165 bits (182), Expect = 3e-38 Identities = 114/129 (88%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 ||||||||||||||| ||||| | ||| | | || ||||||||||||||| |||||| Sbjct 1901 TTATTCTACACCTCTTAAGTCTCCTTACAGTGCCAGATTAGAGTCAAGCTCAAAAGGGTC 1960 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1961 TTCTTTCCCCGCTAATTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 2020 Query 364 ATAGGGACA 372 ||||||||| Sbjct 2021 ATAGGGACA 2029 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| | | ||||||| | | |||| |||| |||||||| |||||| Sbjct 668 CTTTTGCTCTATGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGGACACCTCCGTTATT 727 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| | |||||| ||||||||| ||||||||| ||||| ||||||| Sbjct 728 ATTTGAGAGATGTACCGCCCCAGTCAAACTCCCTACCTGGCAATGTC 774 >seq14203 Length=11121 Score = 111 bits (122), Expect = 5e-22 Identities = 70/76 (92%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 ||||||||||||||| ||||||||||| ||||| |||| |||||||||||||| ||||| Sbjct 3522 AAGAGAGTCATAGTTTCTCCCGCCGTTGACCCGAGCTTACTTGAATTTCTTCACGTTGAC 3581 Query 497 ATTCAGAGCACTGGGC 512 |||||||||||||||| Sbjct 3582 ATTCAGAGCACTGGGC 3597 Score = 96.9 bits (106), Expect = 1e-17 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 372 AGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 431 ||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 985 AGTAGGAATCTCGTAAACCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 1044 Query 432 A 432 | Sbjct 1045 A 1045 >seq26546 Length=1659 Score = 80.6 bits (88), Expect = 9e-13 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| | | ||||||| | | |||| |||| | ||||| |||||| Sbjct 1174 CTTTTGCTCTATGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGACCACCTCCGTTATT 1115 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| | |||||| ||||||||| ||||||||| ||||| ||||||| Sbjct 1114 ATTTGAGAGATGTACCGCCCCAGTCAAACTCCCTACCTGGCAATGTC 1068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634640761600