Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq5493 201 4e-49
seq14203 111 5e-22
seq26546 80.6 9e-13
>seq5493
Length=3029
Score = 201 bits (222), Expect = 4e-49
Identities = 137/154 (89%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338
|| ||||||||||||||| |||||| ||||||||| || ||| ||||||| |||||||
Sbjct 1479 GATTAGAGTCAAGCTCAAAAGGGTCCTCTTTCCCCACTAATTATTCCAAGCCGGTTCCCT 1538
Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398
|||||||| ||||||||||||||| ||||||| ||| | ||||||||||| |||||||||
Sbjct 1539 TGGCTGTGTTTTCGCTAGATAGTACATAGGGAGAGTAGAAATCTCGTTAACCCATTCATG 1598
Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432
|||| ||||||||||||||||||||| |||||||
Sbjct 1599 CGCGACACTAATTAGATGACGAGGCAGTTGGCTA 1632
Score = 165 bits (182), Expect = 3e-38
Identities = 114/129 (88%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303
||||||||||||||| ||||| | ||| | | || ||||||||||||||| ||||||
Sbjct 1901 TTATTCTACACCTCTTAAGTCTCCTTACAGTGCCAGATTAGAGTCAAGCTCAAAAGGGTC 1960
Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1961 TTCTTTCCCCGCTAATTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 2020
Query 364 ATAGGGACA 372
|||||||||
Sbjct 2021 ATAGGGACA 2029
Score = 89.7 bits (98), Expect = 2e-15
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||||||||| | | ||||||| | | |||| |||| |||||||| ||||||
Sbjct 668 CTTTTGCTCTATGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGGACACCTCCGTTATT 727
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| | |||||| ||||||||| ||||||||| ||||| |||||||
Sbjct 728 ATTTGAGAGATGTACCGCCCCAGTCAAACTCCCTACCTGGCAATGTC 774
>seq14203
Length=11121
Score = 111 bits (122), Expect = 5e-22
Identities = 70/76 (92%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496
||||||||||||||| ||||||||||| ||||| |||| |||||||||||||| |||||
Sbjct 3522 AAGAGAGTCATAGTTTCTCCCGCCGTTGACCCGAGCTTACTTGAATTTCTTCACGTTGAC 3581
Query 497 ATTCAGAGCACTGGGC 512
||||||||||||||||
Sbjct 3582 ATTCAGAGCACTGGGC 3597
Score = 96.9 bits (106), Expect = 1e-17
Identities = 58/61 (95%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 372 AGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 431
||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 985 AGTAGGAATCTCGTAAACCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 1044
Query 432 A 432
|
Sbjct 1045 A 1045
>seq26546
Length=1659
Score = 80.6 bits (88), Expect = 9e-13
Identities = 82/107 (77%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||||||||| | | ||||||| | | |||| |||| | ||||| ||||||
Sbjct 1174 CTTTTGCTCTATGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGACCACCTCCGTTATT 1115
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| | |||||| ||||||||| ||||||||| ||||| |||||||
Sbjct 1114 ATTTGAGAGATGTACCGCCCCAGTCAAACTCCCTACCTGGCAATGTC 1068
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634640761600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |