Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq13173 381 5e-101 seq20705 322 4e-83 >seq13173 Length=15772 Score = 381 bits (422), Expect = 5e-101 Identities = 525/725 (72%), Gaps = 17/725 (2%) Strand=Plus/Plus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||| ||||| || ||||||||||| || ||||| ||| ||||||| ||||||| || | Sbjct 13910 AGGCCGAAGCATCTTTCTGGACGGTCGAAGAGGTGGATCTGTCCAAGGACATGACAGATT 13969 Query 61166 GGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCG 61225 || | || | | | ||| | || || || ||||||||||| ||||| |||| Sbjct 13970 GGAATCGCCTGACTGACAATGAGCGTCACTTTATATCTCATGTGTTGGCATTCTTCGCCG 14029 Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG-TTTCGCGCAGGAGGTGCAAGTG 61284 | || || || || ||||| || ||| | | ||||| ||| || ||||||||||| | Sbjct 14030 CATCAGATGGCATTGTCAACGAAAATCTGGTAGAACGCTTTAGC-CAGGAGGTGCAGATA 14088 Query 61285 TCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATG 61344 | ||||| |||||||| || |||||||| |||||||||||||| || || ||||| ||| Sbjct 14089 ACCGAGGCACGTTGTTTTTATGGCTTCCAAATTGCCATGGAGAACGTGCATTCGGAAATG 14148 Query 61345 TACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGAT-TGTTCAA 61403 ||||| || || ||||| || || || | || | |||| | || || | ||||| Sbjct 14149 TACAGCGTACTTATCGACACCTATATACGTGATCCTCATCAACGCG-ACTATCTTTTCAA 14207 Query 61404 TGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCAC 61463 ||| || ||||| || || || || ||||| || ||||| |||||| || |||||| | Sbjct 14208 TGCGATTGAGACTATGCCAGCAGTAAAGCGCAAGGCGGACTGGGCCCTCGCTTGGATTTC 14267 Query 61464 CAGTACAA---CGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGT 61520 | ||| | || | ||||||||||| | | || ||||| | ||||| || | Sbjct 14268 ---TTCAAAGTCAGCCAATTTTGGTGAACGCATTATAGCTTTTGCCGCCGTCGAAGGCAT 14324 Query 61521 ATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGG 61580 || || ||||| || || ||||||||||||||||||| || || ||||||||||| Sbjct 14325 CTTCTTTAGTGGCAGCTTCGCTTCAATCTTTTGGTTGAAGAAGCGCGGTCTTATGCCCGG 14384 Query 61581 TCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGT 61640 ||| |||||| |||||||| || |||||||||||||| | ||||| |||||||| || Sbjct 14385 TCTTACCTTCTCAAATGAGTTAATTTCACGCGACGAGGGTCTACATTGCGATTTTGCCGT 14444 Query 61641 TTTGCTATTCAAACGCTATCTGGTGAATCGTCC--GTCGGAGGAGCGTGTGGGTGAGATT 61698 || | ||| | | ||||||| | ||||| |||| || || | ||| || Sbjct 14445 GCTGATGTTCCAGC---ATCTGGTTCAACGTCCCAGTCG--TGAACGCATTATTGAAATC 14499 Query 61699 GTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTC 61758 || || || ||| ||||||||||| || || || |||||||||||||| | Sbjct 14500 ATTTCAGATGCTGTAGTCATCGAACAGGAGTTCCTCACAGACGCTTTGCCCGTAAACTTA 14559 Query 61759 ATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTG 61818 || ||||||||||| ||| ||||| | || ||||||||||| ||||| |||||| || Sbjct 14560 ATTGGCATGAATTGCAAACTGATGTCTGAATACATTGAATTTGTCGCCGATCGTCTGCTG 14619 Query 61819 GTCGA 61823 || || Sbjct 14620 GTAGA 14624 Score = 91.5 bits (100), Expect = 1e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 61839 GATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGAC 61898 |||||||||||| || |||||||| ||||||||| | ||||||||||| || ||||| Sbjct 14706 GATCTATAATACAAAGAACCCATTCACTTTCATGGAGCTCATTTCGCTGGACGGAAAGAC 14765 Query 61899 GAATTTTTTCGAGAAACGTGTAGGCGACTATCAACGTTTGGGTGT 61943 ||||| || || ||| || ||||| |||||||| |||| || Sbjct 14766 AAATTTCTTTGAAAAAAAAGTGGGCGAGTATCAACGCATGGGCGT 14810 >seq20705 Length=54059 Score = 322 bits (356), Expect = 4e-83 Identities = 1140/1767 (65%), Gaps = 53/1767 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || || ||||| || || || ||||| | || || | | || ||||| || || Sbjct 37341 TCAACAGTAAACTGAATAGCGTTTGCAGCAGGTTTTGTTCGCAAGTAATACATTCCTGTT 37400 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || || ||||| ||| | || ||||| ||||| | | |||| |||| || ||||| Sbjct 37401 TTAAGCCCAGCCTTCCATGAGTAAAAATGTATCGAAGTCAGTTTTCCATAGTTGGGCTCT 37460 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257 ||||| || ||||| || |||||||| ||||| || || ||| | ||| |||||||| Sbjct 37461 GCCACGTGAATATTAAAGGACTGACTTTGATCTATAAAAGCACCCCTATCAGCAGCCATT 37520 Query 65258 TCAAT----GATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTC 65313 | || ||| ||| || || ||||| ||||||||||||| | || || | Sbjct 37521 TTTATTGTTGATTTAACG----GAGATTTCCCATACGGTCTTGTACAAGTCTCGGACGTG 37576 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 ||||| ||||||| || | |||||||| | || || || | || ||| Sbjct 37577 TTGAGGAATAGAATCAATGTTTTGAATAGAACCACGGCTTGATATTATTTGGTTCTTCAT 37636 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTG 65433 || ||| | |||| || | | || | | | | |||| |||| | ||||| Sbjct 37637 GTCGTCATCCCATAGGTCCAATTCTGTCAAATCTCGTAGTAGGTGATGATTTACTACTTG 37696 Query 65434 GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTC 65493 ||| || || || | || || | | || || || || ||| || || |||||||| Sbjct 37697 GAATTCACCAGATAACACCCGTCTGGTGTAAATATTAGATGTGTACGGCTCGAAGGATTC 37756 Query 65494 AGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTT 65553 | | || || | ||||||||||| ||||| || ||||| || || | | ||| || || Sbjct 37757 ATTATTACCCATTATTTGGGCAGTGGATGCTGTAGGCATTGGTGCAATAAGCAAAGAATT 37816 Query 65554 TCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTC----CCAGTTCCACA--TCGG 65607 || | |||| | | ||| ||||| | || ||||| ||| | || | Sbjct 37817 GCGAACGCCGTGTTTCTTAAT----TGACGTTTTAAGTGTATTCCAGTCCCATAAATCTG 37872 Query 65608 TTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGA 65667 || || | | |||||| || | || | | || |||| | || Sbjct 37873 TTG------GAGTTTTATT--CCACATGTCATACTGTAAAATACCTTTACTCACTGGGCT 37924 Query 65668 ACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGC 65727 || | | ||||| || | || | || || | || || | |||||| || Sbjct 37925 GCCTTCATATGTTTCGTAGTAGCCATGTTCTTGTGCGAGCTCGCAACTTGCCTCGAGCGC 37984 Query 65728 GGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTA 65787 ||||||| || ||||||||||| | | || || | |||||||||||| ||||| Sbjct 37985 TCCAAAATATATTGTCTCGAAAATCTGCTGGTTTAGAAGAGATGCCTCATCGCTTTCGTA 38044 Query 65788 CGGCATACC-CATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGAC 65846 || ||||| ||| | || | | ||||| | || ||||| ||||| || || |||| Sbjct 38045 AGG-ATACCGCATTAAGATCAGTGCATCGGCAAAGCCCTGAACACCAATTCCAATAGGAC 38103 Query 65847 GATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGC 65906 | || | || || || | | ||||| |||| ||| || | |||||||| || || Sbjct 38104 GGTGCCTTAAGTTCGATTTTTTAGCCTCTGGTAGAGGATAAAAGTTGATATCAATTATTT 38163 Query 65907 GATTCAAATTGCGTGTCACCACATGCACGATACGTCG--CAATTGTTCGAAATCAAAATG 65964 ||||| || ||| || | | | ||| || ||||| || || || | | Sbjct 38164 TGTTCAAGTTTTTTGTAACAATCTTT--GTTACATCTTTCAATTTTTTAAAGTCGTATTT 38221 Query 65965 TTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTT 66024 ||| ||||||||| |||||| | ||||| | || || | ||| Sbjct 38222 TTTT------TCGGGAGTG---------ACAAACATATTGAGGGCTATGGAAGCTAAGTT 38266 Query 66025 GCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCA 66084 ||| ||||| || || ||||| |||| |||||| ||||||||||| || | ||| ||||| Sbjct 38267 GCAAACAGCAATTTCATCAGGGGCGGAATACTCCACAATTTCGGTACATAAATTGCTGCA 38326 Query 66085 GCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCAT 66144 ||||| || | || ||||||||||| |||||||| || | ||| ||| ||| ||| Sbjct 38327 TTTAATGGTTCCAACGTTTTGTTGATTACTTTTGCGATTACAGGAATCTTTGAACAGCAT 38386 Query 66145 GTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTT 66204 || ||||| || || || ||||| |||||||| || || ||| |||| | || || Sbjct 38387 ATATGGAGTACCAGTTTCTACTTGAGACTCAATTATAGCAAACCACAGAGATTGCGCTTT 38446 Query 66205 CACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTC 66264 | || || || | |||| |||| || | | ||||| | || || ||| Sbjct 38447 AATTGTTCGATTAGCACGGCCTTCCTGTTCATATTTGACATAGAGTTTATCAAACTCTTC 38506 Query 66265 ACCCCATACTTC-GGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCAT 66323 ||||| || || | || || ||||| || ||||| ||||||| |||||||| ||| Sbjct 38507 TCCCCAAACATCATGTAAGCCA-GGACATTTATGTGGGCACATCAATGACCAATCCTCAT 38565 Query 66324 CCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTG 66383 ||| ||||| |||||| ||||| |||||||| | || ||||| ||||| || | Sbjct 38566 TAGCTTCAACACGCTTCATAAAAAGATCTGGTATCCATAAAGCATAGAAAAGATCTCGGG 38625 Query 66384 CTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCA 66442 | || | ||||| |||| ||| ||||| ||||| | || ||||| | ||| | | Sbjct 38626 CACGATTTTCCTCCTTGCCAGTG-TTTTTTTTTAAGTCTAAAAATTCAAACACGTCTGAA 38684 Query 66443 TGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACG 66502 ||||| ||||| | || || || || | || ||| || || || || ||||| || Sbjct 38685 TGCCAAGGTTCTAAATAAATTGCAAAGGCACCAGGACGCTTTCCACCTCCCTGGTCAACA 38744 Query 66503 TAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTG 66562 |||||||| || ||||| || || | | ||| || || | || || || | ||||| Sbjct 38745 TAGCGAGCCACGTTGTTAAAAACTCTTAGCATTGGCACCAAACCATTTGAAGTTCCATTA 38804 Query 66563 GTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCG 66622 || || ||| | | ||| || || || |||||| || | || || ||||| Sbjct 38805 GTTCCACAGATCGAAGTACCTTTAGCACGAATGCAGTGAACGTTTATCCCGATTCCACCA 38864 Query 66623 GCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCA 66682 || | || || || || || | | || | ||||| || ||||| || ||| Sbjct 38865 GCTGATTTGGATATCATTGCGCATTGTTCGACGGATTTAAATATTCCTTCAATTGAATCA 38924 Query 66683 CCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAG 66742 || || || || || | || || ||||| || ||| || |||| ||| Sbjct 38925 GCCACCATCGTAAGAAGAAAACACGACGACAGTTGCGGCCGATTTGTAGCTGCCGCGAAA 38984 Query 66743 AGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAA-TTGTACGTCTCGATGAC 66801 || || || | ||| || || || | || || | | | || |||||||| || | | Sbjct 38985 AGTGTTGGCGAAGCATGGGTGAAAT-ATCGCTCGGAAAGCAAGTTGTACGTTTCAACTGC 39043 Query 66802 AGCATCAATGTTTTCGCCATGAATCCC 66828 ||||| || | ||||||||| || || Sbjct 39044 CGCATCGATATCTTCGCCATGTATTCC 39070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397402288688000