Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq58621 80.6 1e-13 seq67301 71.6 8e-11 seq64617 71.6 8e-11 seq18844 71.6 8e-11 >seq58621 Length=484 Score = 80.6 bits (88), Expect = 1e-13 Identities = 88/117 (75%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||| |||| || ||| |||| ||||||| ||| ||| | Sbjct 222 GAACCCAAAAGCTTTGGTTTCCCGGAAGCTGCCCGCCGAGTCATCGGAGGAACTTCGGCG 163 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| |||| ||||| ||||| ||||| |||| | ||||||||||||| |||||| Sbjct 162 GATCGCTAGCTGGCATCGTTTATGGTTAGAACTAGGGCGGTATCTGATCGCCTTCGA 106 >seq67301 Length=807 Score = 71.6 bits (78), Expect = 8e-11 Identities = 86/117 (74%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||| ||||| ||||| |||| || ||| |||| ||||||| ||| || | Sbjct 254 GAATCCAAAATCTTTGGTTTCCCGGAAGCTGCCCGCCGAGTCATCGGAGGAACTTCAGCG 313 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| |||| ||||| ||||| ||||| |||| | ||||||||||||| |||||| Sbjct 314 GATCGCTAGCTGGCATCGTTTATGGTTAGAACTAGGGCGGTATCTGATCGCCTTCGA 370 >seq64617 Length=1007 Score = 71.6 bits (78), Expect = 8e-11 Identities = 86/117 (74%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||| ||||| ||||| |||| || ||| |||| ||||||| ||| || | Sbjct 743 GAATCCAAAATCTTTGGTTTCCCGAAAGTTGCCCGCCGAGTCATTGGAGGAACTTCAGCG 684 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| |||| ||||| ||||| ||||| |||| | ||||||||||||| |||||| Sbjct 683 GATCGCTAGCTGGCATCGTTTATGGTTAGAACTAGGGCGGTATCTGATCGCCTTCGA 627 >seq18844 Length=490 Score = 71.6 bits (78), Expect = 8e-11 Identities = 86/117 (74%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||| ||| || ||| |||| ||||||| ||| ||| | Sbjct 353 GAACCCAAAAGCTTTGGTTTTCCGGAAGCTGCCCGCCGAGTCATCGGAGGAACTTCGGCG 412 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| |||| ||||| ||||| | ||| |||| | ||||||||||||| |||||| Sbjct 413 GATCGCTAGCTGGCATCGTTTATGTTTAGAACTAGGTCGGTATCTGATCGCCTTCGA 469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278218576290