Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq67301 176 8e-42 seq5005 174 3e-41 seq15285 168 1e-39 seq64617 147 4e-33 >seq67301 Length=807 Score = 176 bits (194), Expect = 8e-42 Identities = 214/284 (75%), Gaps = 12/284 (4%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| |||| |||| | | |||| || ||||||||||| ||||||||||| | Sbjct 654 TGCTCTTTACTGAGTGTCGAGTCGGACCAGTACGTTTACTTTGAACAAATTAGAGTGCTT 595 Query 100 AAAGCAGGCCTTTGCTC----GAATACATTA-GCATGGAATAATAGAATAGGACGTGCGG 154 ||||||||| | | ||| |||||| |||||||||||| |||||||| | ||| Sbjct 594 AAAGCAGGC-TATCCTCACCTGAATACTGCGTGCATGGAATAATGCAATAGGACCT-CGG 537 Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTAATAGGGATAGTCGGGGGTG 211 ||||||||||||||||| | ||| | ||| |||||||||||||||| || |||| Sbjct 536 TTCTATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATTAATAGGGACAGATAGGGGCA 478 Query 212 TCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAA 271 | ||||| || |||||||||||||||||||| ||||| || ||||| Sbjct 477 TTCGTATTGCGACGTTAGAGGTGAAATTCTTGGATTGTCGCAAGACGGACAGAATCGAAA 418 Query 272 GCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315 || || ||||| |||||||||||||||| ||||||||||||| Sbjct 417 GCATTTACCAAAAATGTTTTCATTAATCA-AGAACGAAAGTTAG 375 >seq5005 Length=26319 Score = 174 bits (192), Expect = 3e-41 Identities = 214/286 (75%), Gaps = 10/286 (3%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| |||| |||| | | ||| | || ||||||||||| ||||||||||| | Sbjct 16369 TGCTCTTTACTGAGTGTCGAGTCGGGCCGGTACGTTTACTTTGAACAAATTAGAGTGCTT 16310 Query 100 AAAGCAGGC---CTTTGCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGT 155 ||||||||| | | || |||||| |||||||||||| ||||||||| | |||| Sbjct 16309 AAAGCAGGCTATCCTCGCCTGAATACTGCGTGCATGGAATAATGGAATAGGACCT-CGGT 16251 Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTAATAGGGATAGTCGGGGGTGT 212 |||||||||||||||| | ||| | ||| |||||||||||||||| || ||||| | Sbjct 16250 TCTATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATTAATAGGGACAGATGGGGGCAT 16192 Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272 ||||| || ||||||||||||||||||| ||||| | || |||| Sbjct 16191 TCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCACAAGACGGATAGAAGCTAAAG 16132 Query 273 CGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | || |||| |||||||||||||||| ||||||||||||| || Sbjct 16131 CATTTGCCAAAAATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 16087 >seq15285 Length=534 Score = 168 bits (186), Expect = 1e-39 Identities = 213/286 (74%), Gaps = 10/286 (3%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| |||| |||| | | ||| | || ||||||||||| ||||||||||| | Sbjct 85 TGCTCTTTACTGCGTGTCGAGTCGGGCCGGTACGTTTACTTTGAACAAATTAGAGTGCTT 144 Query 100 AAAGCAGGC---CTTTGCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGT 155 ||||||||| | | || |||||| | ||||||| |||| ||||||||| | |||| Sbjct 145 AAAGCAGGCTATCCTCGCCTGAATACTTCGTGCATGGAGTAATGGAATAGGACCT-CGGT 203 Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTAATAGGGATAGTCGGGGGTGT 212 |||||||||||||||| | ||| | ||| |||||||||||||||| || | ||| | Sbjct 204 TCTATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATTAATAGGGACAGATGTGGGCAT 262 Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272 ||||| || ||| ||||||||||||||| ||||| || |||||| Sbjct 263 TCGTATTGCGACGTTAGATGTGAAATTCTTGGATCGTCGCAAGACGGACAGAAGCGAAAT 322 Query 273 CGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | || |||| |||||||||||||||| ||||||||||||| || Sbjct 323 CATTTGCCAAAAATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 367 >seq64617 Length=1007 Score = 147 bits (162), Expect = 4e-33 Identities = 209/284 (74%), Gaps = 14/284 (5%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGG-GGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 ||| ||| |||| |||| | ||||| | || ||||| |||| |||||||||| | Sbjct 343 TGCTCTTTACTGAGTGTCGAGTCGGAGCT-GTACGTTTACATTGACCAAATTAGAGTTCT 401 Query 99 CAAAGCAGGCCTTTGCTC----GAATACATTA-GCATGGAATAATAGAATAGGACGTGCG 153 ||||||||| || ||| |||||| |||||||||||| |||||||| | || Sbjct 402 TAAAGCAGGCTATT-CTCACCTGAATACTGCGTGCATGGAATAATGCAATAGGACCT-CG 459 Query 154 GTTCTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTAATAGGGATAGTCGGGGGT 210 |||||||||||||||||| | ||| | ||| |||||||||||||||| || | || Sbjct 460 GTTCTATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATTAATAGGGACAGATAGAGGC 518 Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAA 270 | ||||| || ||||||||||||||||||| ||||| ||| |||| Sbjct 519 ATTCGTATTGCGAAGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGGACTGAATCGAA 578 Query 271 AGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 ||| || ||||| |||||||||||||||| | |||||||||| Sbjct 579 AGCATTTACCAAAAATGTTTTCATTAATCA-AGTACGAAAGTTA 621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914563835328