Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq30243 168 2e-39 >seq30243 Length=658 Score = 168 bits (186), Expect = 2e-39 Identities = 213/285 (75%), Gaps = 12/285 (4%) Strand=Plus/Plus Query 91 CCCCCTAGACCATC-CAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAAT 149 ||| |||| |||| |||||||||||| || |||||| || | | || |||||||| Sbjct 379 CCCGCTAG-CCATAACAGTGCTCTACCCCCAGGAAGATTCATACAAGGCGCTACCTAAAT 437 Query 150 GCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGG 209 ||||| ||||||||||||||| | |||||| || ||||||||| || |||| || Sbjct 438 AGCTTTCGAGGAGAACCAGCTATCTCCGAGTTTGTTTAGCCTTTCACTCCAATCCTCAAC 497 Query 210 TCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTT 269 |||||||| || |||| | ||||||||||||||||| || ||||| ||| Sbjct 498 TCATCCCCATCTATTGCAACAGATGTGGGTTCGGTCCTCCAGTGCGTGTTACCGCACCTT 557 Query 270 CAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCT--TG--ATCGTGCCACTCATACG 325 ||||||| || |||||||||||| | ||||||||| || || | ||| ||||| Sbjct 558 CAACCTGGTCAAGGATAGATCACTCGGTTTCGGGTCTACTGCCATAG----ACT-ATACG 612 Query 326 CCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAA 370 |||||||| |||||| |||| || || || ||| || | |||||| Sbjct 613 CCCTATTCAGACTCGGTTTCCCTTCGCCTCCCCTAC-CCGGTTAA 656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1816336568064