Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq30243 120 8e-25 seq20601 75.2 3e-11 seq13853 75.2 3e-11 seq10435 75.2 3e-11 >seq30243 Length=658 Score = 120 bits (132), Expect = 8e-25 Identities = 141/182 (77%), Gaps = 8/182 (4%) Strand=Plus/Plus Query 3 TCCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTA 62 ||| |||| || |||| || | || || |||| | || |||||||||||||||| Sbjct 485 TCCAATCCTCAACTCATCCCCAT--CTATTGCAACAGATGTGGGTTCGGTCCTCCAGTGC 542 Query 63 GTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTT 122 || |||||| ||||| ||||||| || |||||||||| | |||||| |||||||| | Sbjct 543 GT-GTTACCGCACCTT-CAACCTGGTCA-AGGATAGATCACTCGGTTT-CGGGTCTACTG 598 Query 123 CCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAA 182 || | ||||| |||||||| | ||||||| ||| | || ||||||||||| ||||||| Sbjct 599 CC-ATAGACTATACGCCCTATTCAGACTCGGTTTCC-CTTCGCCTCCCCTACCCGGTTAA 656 Query 183 GC 184 || Sbjct 657 GC 658 >seq20601 Length=1086 Score = 75.2 bits (82), Expect = 3e-11 Identities = 78/101 (77%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 430 ACGGTTTCACGTACTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 372 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| |||| ||||||||| || |||||||||||| || Sbjct 371 ACTTGTTCGCTATCGGTCTCGTGGTCGTATTTAGCCTTAGA 331 >seq13853 Length=1016 Score = 75.2 bits (82), Expect = 3e-11 Identities = 78/101 (77%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||||| || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 396 ACGGTTTCAGGTACTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 338 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| |||| |||||||| || |||||||||||| || Sbjct 337 ACTTGTTCGGTATCGGTCTCGTGGTCGTATTTAGCCTTAGA 297 >seq10435 Length=2078 Score = 75.2 bits (82), Expect = 3e-11 Identities = 78/101 (77%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||||| || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 1995 ACGGTTTCAGGTACTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 1937 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| |||| |||||||| || |||||||||||| || Sbjct 1936 ACTTGTTCGGTATCGGTCTCGTGGTCGTATTTAGCCTTAGA 1896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1240736951424