Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq56286 91.5 9e-17 seq33817 91.5 9e-17 seq24462 91.5 9e-17 seq21384 91.5 9e-17 seq38306 87.8 1e-15 seq4062 87.8 1e-15 seq17728 82.4 5e-14 seq7657 82.4 5e-14 seq5005 82.4 5e-14 seq8433 80.6 2e-13 seq61490 78.8 6e-13 >seq56286 Length=675 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 557 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 613 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 614 GGCAGGGACGTAAT-CAACGCGAGCT 638 >seq33817 Length=1109 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 224 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 280 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 281 GGCAGGGACGTAAT-CAACGCGAGCT 305 >seq24462 Length=629 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 358 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 414 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 415 GGCAGGGACGTAAT-CAACGCGAGCT 439 >seq21384 Length=477 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 232 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 288 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 289 GGCAGGGACGTAAT-CAACGCGAGCT 313 >seq38306 Length=568 Score = 87.8 bits (96), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| ||||||||| Sbjct 298 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAC 354 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 355 GGCAGGGACGTAAT-CAACGCGAGCT 379 >seq4062 Length=20469 Score = 87.8 bits (96), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 17384 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 17328 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| || ||| |||| Sbjct 17327 GGCAGGGACGTAAT-CAGCGCGAGCT 17303 >seq17728 Length=390 Score = 82.4 bits (90), Expect = 5e-14 Identities = 73/86 (85%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 116 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 172 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 ||||| ||||||| |||||| |||| Sbjct 173 GGCAGTTACGTAAT-CAACGCGAGCT 197 >seq7657 Length=55636 Score = 82.4 bits (90), Expect = 5e-14 Identities = 73/86 (85%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 37917 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 37973 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 ||||| ||||||| |||||| |||| Sbjct 37974 GGCAGTTACGTAAT-CAACGCGAGCT 37998 >seq5005 Length=26319 Score = 82.4 bits (90), Expect = 5e-14 Identities = 73/86 (85%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 15351 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 15407 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||| |||||||| |||||| |||| Sbjct 15408 GGCAATGACGTAAT-CAACGCGAGCT 15432 >seq8433 Length=20181 Score = 80.6 bits (88), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 3/75 (4%) Strand=Plus/Plus Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109 ||||||| |||| || ||||||||| ||||||||||| | |||||||||||| |||||| Sbjct 19161 TCACTAAAGCATT-CAATCGGTAGTA-GCGACGGGCGGTGCGTACAAAGGGCAAGGACGT 19218 Query 110 AATACAACGCAAGCT 124 ||| |||||| |||| Sbjct 19219 AAT-CAACGCGAGCT 19232 >seq61490 Length=1738 Score = 78.8 bits (86), Expect = 6e-13 Identities = 72/86 (84%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 1421 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 1477 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 ||||| |||||| |||||| |||| Sbjct 1478 GGCAGTTTCGTAAT-CAACGCGAGCT 1502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300603978980