Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq15285 77.0 4e-12 seq5005 77.0 4e-12 seq67301 75.2 1e-11 >seq15285 Length=534 Score = 77.0 bits (84), Expect = 4e-12 Identities = 82/105 (78%), Gaps = 5/105 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTA-ATGTATTCGGGC 68 ||||||||||||||| || | ||||||||| |||| ||||||| | |||||| ||| Sbjct 219 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTACTCCATGCACGAAGTATTCAGGC 161 Query 69 GTA---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | |||||||||| | ||||||||||| |||| ||||| || Sbjct 160 GAGGATAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGT 116 >seq5005 Length=26319 Score = 77.0 bits (84), Expect = 4e-12 Identities = 82/105 (78%), Gaps = 5/105 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGGC 68 ||||||||||||||| || | ||||||||| |||||||||||| |||||| ||| Sbjct 16235 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACGCAGTATTCAGGC 16293 Query 69 GTA---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | |||||||||| | ||||||||||| |||| ||||| || Sbjct 16294 GAGGATAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGT 16338 >seq67301 Length=807 Score = 75.2 bits (82), Expect = 1e-11 Identities = 85/111 (77%), Gaps = 5/111 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGGC 68 ||||||||||||||| || | |||||||| |||||||||||| |||||| || Sbjct 520 AAACCAACAAAATAGAACCG-AGGTCCTATTGCATTATTCCATGCACGCAGTATTCAGGT 578 Query 69 GTA---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGT 116 | |||||||||| | ||||||||||| |||| ||||| || ||||| Sbjct 579 GAGGATAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGTACTGGT 629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594799199574