Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq30243 365 2e-98 >seq30243 Length=658 Score = 365 bits (404), Expect = 2e-98 Identities = 377/484 (78%), Gaps = 12/484 (2%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCG-ACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| |||||| | |||| ||| |||||||||||||| ||||||||| || | Sbjct 627 CGAGTCTGAATAGGGCGTATAGTCTATGGCAGTAGACCCGAAACCGAGTGATCTATCCTT 568 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 | ||||| ||||||||||||||||||| ||||||| |||||||||| ||||| || | Sbjct 567 GACCAGGTTGAAGGTGCGGTAACACGCACTGGAGGACCGAACCCACATCTGTTGCAATAG 508 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||||||||| || || | || ||||||||||||||||||| ||| ||||||||||||| Sbjct 507 ATGGGGATGAGTTGAGGATTGGAGTGAAAGGCTAAACAAACTCGGAGATAGCTGGTTCTC 448 Query 181 TCCGAAAACTATTTAGGTAGTGCCT--CAAGTATCACCATCGGGGGTAGAGCACTGTTAT 238 ||||| |||||||||||| |||| | | ||| | | ||||||||||||||||||| Sbjct 447 CTCGAAAGCTATTTAGGTAGCGCCTTGTATGAATCTTCCT-GGGGGTAGAGCACTGTTAT 389 Query 239 GGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCA--TCAGTTT 296 |||||| ||||||| |||||||| ||||||| ||||||| ||||| | || ||| | Sbjct 388 GGCTAGCGGGTCATCGCGACTTAGTAAACCATGGCAAACTGCGAATAC-CAGGACAGAGT 330 Query 297 TACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356 || | || | ||| ||||||||| |||||| |||||| || || || ||| Sbjct 329 GTACGGGAGACACACGGC--GGGTGCTAACGTCCGTCGTGGAGAGGGAAACAACCCAGAC 272 Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416 ||||||||| ||| || | | ||| ||| || |||||||| || || |||| Sbjct 271 CCGCAGCTAAGGTCCCCAAGTTAGTGCTGAGTGGAA--AACGAAGTGGGAAGGCATAGAC 214 Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476 ||| |||| |||||||| |||||||||| | |||||||| |||||| |||||||| || Sbjct 213 AGCCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTTAAAGAAAGCGTAATAGCTCACTGGT 155 Query 477 CGAG 480 |||| Sbjct 154 CGAG 151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1688425542144