Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08]
69,511 sequences; 396,024,718 total letters
Query= NC_033313.1
Length=1789
Score E
Sequences producing significant alignments: (Bits) Value
seq6012 143 3e-31
>seq6012
Length=48725
Score = 143 bits (158), Expect = 3e-31
Identities = 273/398 (69%), Gaps = 8/398 (2%)
Strand=Plus/Minus
Query 371 AGATATCTTTGGAGATATGAAAGTAATTCCTTTAACACATGGAGCAGTAGCCAACCATCC 430
||||||||| || ||||||||| | | |||||||| |||| ||| || || |||
Sbjct 24424 AGATATCTTCGGTGATATGAAAATTGTACCTTTAACGCATGAAGCTGTTTTGAAACATGA 24365
Query 431 AGATCTGCCTAGACAGAAATCACCTGGATTACCATATAAGACACAAGGTTACGCGACAAA 490
|| | || | ||| ||| ||| ||||| ||||| ||||| || || | ||
Sbjct 24364 GAATTTACCACGTGCGAAGTCATGTGGTTTACCTCTTAAGAATCAAGGCTATGCAATTAA 24305
Query 491 AGGGGAGGCTTTAGATGATCCGAATACTTTGAAAAAT---ATACGAGCAACATGGTATGC 547
||| || || | ||||||||||| | | | |||| ||| || || |||||| |
Sbjct 24304 AGGAGAAGCACTTGATGATCCGAACA---TCATAAATGCAATAAGAACAGAATGGTACGT 24248
Query 548 AATCGAAAGATCAGAGGACGTCACTTTACCAGATGTGGCATGTTACGCACGAGCTCAAAT 607
|| |||||| ||| ||||| |||| ||||| | |||||||| || || |||||
Sbjct 24247 CATAGAAAGACAAGAAGACGTTCAACTACCGGATGTCGTTTGTTACGCGCGTGCGCAAAT 24188
Query 608 TTGCAGTAGAGATAAAAATAAAATTAGAGCTACTTGGGGTTACCCGTTGTCAGTATTTCT 667
|| || || |||| |||||| | |||| || ||| |||| || || | | || ||
Sbjct 24187 ATGTAGCAGGTATAAGAATAAAGTGAGAGTCACATGGAGTTATCCTTTAACGGGATACCT 24128
Query 668 GACAGAAGCTCAATATTTCTATCCTATACT-GAAAGAGCTAAAACAGCGAGATAAGCCAA 726
|| |||| |||||| || |||| ||| || || | | || |||| || ||||
Sbjct 24127 TACTGAAGGTCAATACTTTTATCTTATGCTAGATAAACTTACAACA-AAAGCATCCCCAA 24069
Query 727 AGATAGCTTATGGAGTTGAAATTGGAACAGGAGGCATG 764
||| |||||||| | ||||| ||||| ||||| |||
Sbjct 24068 CGATTGCTTATGGCATCGAAATGGGAACTGGAGGTATG 24031
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5611852278630
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |