Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_033313.1 Length=1789 Score E Sequences producing significant alignments: (Bits) Value seq6012 143 3e-31 >seq6012 Length=48725 Score = 143 bits (158), Expect = 3e-31 Identities = 273/398 (69%), Gaps = 8/398 (2%) Strand=Plus/Minus Query 371 AGATATCTTTGGAGATATGAAAGTAATTCCTTTAACACATGGAGCAGTAGCCAACCATCC 430 ||||||||| || ||||||||| | | |||||||| |||| ||| || || ||| Sbjct 24424 AGATATCTTCGGTGATATGAAAATTGTACCTTTAACGCATGAAGCTGTTTTGAAACATGA 24365 Query 431 AGATCTGCCTAGACAGAAATCACCTGGATTACCATATAAGACACAAGGTTACGCGACAAA 490 || | || | ||| ||| ||| ||||| ||||| ||||| || || | || Sbjct 24364 GAATTTACCACGTGCGAAGTCATGTGGTTTACCTCTTAAGAATCAAGGCTATGCAATTAA 24305 Query 491 AGGGGAGGCTTTAGATGATCCGAATACTTTGAAAAAT---ATACGAGCAACATGGTATGC 547 ||| || || | ||||||||||| | | | |||| ||| || || |||||| | Sbjct 24304 AGGAGAAGCACTTGATGATCCGAACA---TCATAAATGCAATAAGAACAGAATGGTACGT 24248 Query 548 AATCGAAAGATCAGAGGACGTCACTTTACCAGATGTGGCATGTTACGCACGAGCTCAAAT 607 || |||||| ||| ||||| |||| ||||| | |||||||| || || ||||| Sbjct 24247 CATAGAAAGACAAGAAGACGTTCAACTACCGGATGTCGTTTGTTACGCGCGTGCGCAAAT 24188 Query 608 TTGCAGTAGAGATAAAAATAAAATTAGAGCTACTTGGGGTTACCCGTTGTCAGTATTTCT 667 || || || |||| |||||| | |||| || ||| |||| || || | | || || Sbjct 24187 ATGTAGCAGGTATAAGAATAAAGTGAGAGTCACATGGAGTTATCCTTTAACGGGATACCT 24128 Query 668 GACAGAAGCTCAATATTTCTATCCTATACT-GAAAGAGCTAAAACAGCGAGATAAGCCAA 726 || |||| |||||| || |||| ||| || || | | || |||| || |||| Sbjct 24127 TACTGAAGGTCAATACTTTTATCTTATGCTAGATAAACTTACAACA-AAAGCATCCCCAA 24069 Query 727 AGATAGCTTATGGAGTTGAAATTGGAACAGGAGGCATG 764 ||| |||||||| | ||||| ||||| ||||| ||| Sbjct 24068 CGATTGCTTATGGCATCGAAATGGGAACTGGAGGTATG 24031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5611852278630