Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_033778.1 Length=111453 Score E Sequences producing significant alignments: (Bits) Value seq5438 84.2 2e-11 >seq5438 Length=457287 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 26020 AGATTAATAACATTTGAAACATGGCCAAAAGCAATGATGCGAATTAAAGAACAACTTTCA 26079 |||||| |||||||| | |||||||||||||||| | || ||||||| || | | Sbjct 379589 AGATTAGCGACATTTGACAGATGGCCAAAAGCAATGTCACAAACTAAAGAAGAATTGGCG 379530 Query 26080 AATGCGGGttttttttATTCAGGAAATGGAGATAAAGTATTATGTTATCAATGTGGTGG 26138 | ||| ||||| | ||| |||||| ||| ||| | |||||||||||| || ||||| Sbjct 379529 ACTGCTGGTTTCTATTACACAGGAAGTGGCGATCAGACATTATGTTATCACTGCGGTGG 379471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356222764556394