Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphyracephala_20brevicornis_20[genbank_20GCA_5F001015235.1_202015- 05-29] 135,449 sequences; 315,521,093 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq99241 250 6e-64 seq68727 93.3 1e-16 >seq99241 Length=1943 Score = 250 bits (276), Expect = 6e-64 Identities = 245/316 (78%), Gaps = 0/316 (0%) Strand=Plus/Plus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| ||||||||| |||||||||||||||||||||||| ||| ||| ||||||| Sbjct 1628 GAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA 1687 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130 |||| ||| |||| ||||| ||||| |||||| | |||| ||| |||||| Sbjct 1688 TCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGGAGATTAAGTCAGCGGTGAAAGTTT 1747 Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTG 190 |||| ||||| |||||| ||| |||| || |||||| || | || | Sbjct 1748 GAGGCTCAACCTTAAAATTGCCGTTGAAACTGGTTTCCTTGAGTGTAAATGAAGTAGGCG 1807 Query 191 GAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCA 250 |||||| ||||||| ||||||||| ||||||| || |||| ||||| ||||||||| Sbjct 1808 GAATTCGTGGTGTAGCGGTGAAATGCATAGATATCACGAAGAACTCCAATTGCGAAGGCA 1867 Query 251 GCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGAT 310 || || | || ||||||||| | ||||||||||||||| | ||||||||||||||| Sbjct 1868 GCTTACTAAGCTACAACTGACGCTGAAGCACGAAAGCGTGGGTATCAAACAGGATTAGAT 1927 Query 311 ACCCTGGTAGTCCACG 326 |||||||||||||||| Sbjct 1928 ACCCTGGTAGTCCACG 1943 >seq68727 Length=1679 Score = 93.3 bits (102), Expect = 1e-16 Identities = 54/56 (96%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGG 58 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1624 TACCCAAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGG 1679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1287853249696