Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphyracephala_20brevicornis_20[genbank_20GCA_5F001015235.1_202015- 05-29] 135,449 sequences; 315,521,093 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq90079 140 5e-31 seq109657 102 1e-19 >seq90079 Length=2614 Score = 140 bits (154), Expect = 5e-31 Identities = 89/97 (92%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 162 TCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACC 221 ||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||||||| | Sbjct 369 TCGTTCGTTATCGGATTTAAACAGACAAATCACTCCACGAACTAAGAATGGCCATGCAGC 310 Query 222 ACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||| || ||||||||||||||||||||| Sbjct 309 GCCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 273 Score = 87.8 bits (96), Expect = 3e-15 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 162 TCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 ||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||||||| Sbjct 234 TCGTTCGTTATCGGATTTAAACAGACAAATCACTCCACGAACTAAGAATGGCCATGCA 177 >seq109657 Length=1521 Score = 102 bits (112), Expect = 1e-19 Identities = 88/106 (83%), Gaps = 5/106 (5%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 900 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 958 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | |||| | |||||||| || Sbjct 959 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 1002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795754469169