Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphyracephala_20brevicornis_20[genbank_20GCA_5F001015235.1_202015- 05-29] 135,449 sequences; 315,521,093 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq99241 253 6e-65 seq68727 132 1e-28 >seq99241 Length=1943 Score = 253 bits (280), Expect = 6e-65 Identities = 275/360 (76%), Gaps = 21/360 (6%) Strand=Plus/Plus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220 |||| | ||||||||||||||||||||||||||||||||||| ||||| | ||| || | Sbjct 1375 GCGTTTCATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCAACGATGAATAGGGGAAC 1434 Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280 ||||||| | ||| ||||| ||| |||||||||||| ||| |||||||||||||||||| Sbjct 1435 TGAGAGGTTTATCCCCCACACTGGTACTGAGACACGGACCAGACTCCTACGGGAGGCAGC 1494 Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA- 339 |||| ||||||||| |||||| | ||| |||| |||| | | ||||||| || || Sbjct 1495 AGTGAGGAATATTGGTCAATGGACGCAAGTCTGAACCAGCCAAGTCGCGTGAAGGAAGAC 1554 Query 340 AGGCCTTCGGGTCGTAAAGCTC---TGTCCTCAAGGAAGATA-ATGACG-GT----ACTT 390 | ||| ||||| ||||| || ||| || || || | | | |||| || ||| Sbjct 1555 TGCCCTACGGGTTGTAAACTTCTTTTGTGCTAGAGTAAAACAGAGGACGTGTCCTCTCTT 1614 Query 391 G----------AGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAG 440 | | || |||| ||||||||| |||||||||||||||||||||||| || Sbjct 1615 GCAAGTATAGTACGAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAG 1674 Query 441 GGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 | || ||||||||||||| ||| | ||| ||||||||||||||| || ||||||| Sbjct 1675 GATGCGAGCGTTATCCGGATTTA-TTGGGTTTAAAGGGTGCGTAGGCGGGAGATTAAGTC 1733 >seq68727 Length=1679 Score = 132 bits (146), Expect = 1e-28 Identities = 152/208 (73%), Gaps = 25/208 (12%) Strand=Plus/Plus Query 259 CCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCA 318 ||| |||||||||||||||||||||||||||| ||| |||||||| || |||||| || Sbjct 1472 CCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGATCCA 1531 Query 319 GCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCT-------CAA- 370 || | |||||||| || |||||||||||||| |||||| || | | ||| Sbjct 1532 GCCATGCCGCGTGTCTGAAGAAGGCCTTCGGGTTGTAAAGGACTTTTGTTGGGGAGCAAA 1591 Query 371 -------GGAAGATAATGACGGTACTTGAG----------GAGGAAGCCCCGGCTAACTA 413 | | ||||||| || |||| || |||| ||||||||||| Sbjct 1592 TCGCTTTTGTAAATAATGAAAGTGGATGAGAGTACCCAAAGAATAAGCACCGGCTAACTA 1651 Query 414 CGTGCCAGCAGCCGCGGTAATACGTAGG 441 |||||||||||||||||||||||||||| Sbjct 1652 CGTGCCAGCAGCCGCGGTAATACGTAGG 1679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1495571515776