Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphyracephala_20brevicornis_20[genbank_20GCA_5F001015235.1_202015- 05-29] 135,449 sequences; 315,521,093 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq99241 269 6e-70 seq68727 75.2 3e-11 >seq99241 Length=1943 Score = 269 bits (298), Expect = 6e-70 Identities = 247/312 (79%), Gaps = 0/312 (0%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| ||||||||| |||||||||||||||||||||||| ||| || ||||||||||| Sbjct 1632 AAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTATCCG 1691 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 || ||| |||| ||||||||||||||| || ||||||||| |||||||| | || Sbjct 1692 GATTTATTGGGTTTAAAGGGTGCGTAGGCGGGAGATTAAGTCAGCGGTGAAAGTTTGAGG 1751 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 ||||||| | ||| ||||||||| || ||||| | | | | | ||||| Sbjct 1752 CTCAACCTTAAAATTGCCGTTGAAACTGGTTTCCTTGAGTGTAAATGAAGTAGGCGGAAT 1811 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 || | ||||||||||||||||| ||||||| | || |||| ||| | |||||||| |||| Sbjct 1812 TCGTGGTGTAGCGGTGAAATGCATAGATATCACGAAGAACTCCAATTGCGAAGGCAGCTT 1871 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 || || ||||||| |||| || |||||||||||| | ||||||||||||||||||| Sbjct 1872 ACTAAGCTACAACTGACGCTGAAGCACGAAAGCGTGGGTATCAAACAGGATTAGATACCC 1931 Query 313 TGGTAGTCCACG 324 |||||||||||| Sbjct 1932 TGGTAGTCCACG 1943 >seq68727 Length=1679 Score = 75.2 bits (82), Expect = 3e-11 Identities = 43/44 (98%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGG 56 |||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1636 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGG 1679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1201570277632