Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq11222 140 1e-30 seq90709 82.4 3e-13 >seq11222 Length=270 Score = 140 bits (154), Expect = 1e-30 Identities = 109/130 (84%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || | || |||||||||||||||||||||| ||||| ||| |||||||||| Sbjct 165 AGAGCGTACTGGATGCGACCCGAAAGATGGTGAACTATACCTGAGCAGGATGAAGCCAGA 106 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||| | || | || ||||| ||||||||||||||| | | |||||| Sbjct 105 GGAAACTCTGGTGGAAGTCCGTATCGCTTCTGACGTGCAAATCGATCGATAGACTTGGGT 46 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 45 ATAGGGGCGA 36 >seq90709 Length=1112 Score = 82.4 bits (90), Expect = 3e-13 Identities = 93/124 (75%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||| |||| ||| | |||||| | || | || |||||| | | |||||||||||| Sbjct 288 GAGTCAGGTTGCTTGAAAGTGCAGCCCAAAGTAGGTGGTAAACTCCACCTAAAGCTAAAT 347 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||| |||||||||||| ||||||| |||| ||||| || |||| |||||| | Sbjct 348 ATTACTGCGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGTTGCAAAGAACTTTG--A 405 Query 160 AGAG 163 |||| Sbjct 406 AGAG 409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2077821859750