Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq40142 96.9 4e-18 >seq40142 Length=429 Score = 96.9 bits (106), Expect = 4e-18 Identities = 133/181 (73%), Gaps = 9/181 (5%) Strand=Plus/Minus Query 5 CTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATA 64 ||||||||||| ||||||| |||||||| | ||||| ||||||| |||| || || | Sbjct 258 CTGAAGCTTAGTGGCTTTTCCTGGAAGCAGAGGATCAATCACTTCG--ATCTCAATGAGA 201 Query 65 ACTCGTCATCAGCTCCCGGCCTTA----GAATCCCGGATTTACCTAAGATTCCA-GCCTA 119 |||||||||| | | | ||| | || |||||||| ||||| | ||| |||| Sbjct 200 CCTCGTCATCACGCCTCAGTGTTAATAGGGAT-CCGGATTTGCCTAA-ACCCCACACCTA 143 Query 120 CCACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGC 179 | ||||||| |||| ||||| || |||| ||| | ||||||||||| |||||| Sbjct 142 CACGCTTAAACCGGGACTTCCAACACCCGGCTGATCTACCTTTCTCCGTCCCCACATCGC 83 Query 180 A 180 | Sbjct 82 A 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517890041010