Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq44859 253 5e-65 seq47355 232 2e-58 seq27309 185 2e-44 >seq44859 Length=430 Score = 253 bits (280), Expect = 5e-65 Identities = 236/300 (79%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||| |||| |||||||||| |||||||||||||||||||||||| |||| || |||||| Sbjct 131 AGAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTT 190 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 ||||||||||||||||||||||| || |||||| | |||||| || |||||| || Sbjct 191 GTTCGGAATTACTGGGCGTAAAGCGCACGTAGGCGGCTTTGTAAGTTAGAGGTGAAAGCC 250 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189 | ||| ||| ||||||| ||| ||||||| || || | ||||| | || Sbjct 251 TGGAGCTCAACTCCAGAATTGCCTTTAAGACTGCATCGCTTGAATCCAGGAGAGGTGAGT 310 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||||| |||||| ||||||| ||||||||| | | |||||||| |||||||||| Sbjct 311 GGAATTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGCAAGAACACCAGTGGCGAAGGC 370 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 || | |||| ||||||||| | | ||||||||||||||||||||||||||||| Sbjct 371 GGCTCACTGGTCCGGTACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGA 430 >seq47355 Length=988 Score = 232 bits (256), Expect = 2e-58 Identities = 154/171 (90%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 171 TACCGGAAGAATCAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 112 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||||||||||||||||||||||||||||||||||| |||| |||||||| || Sbjct 111 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGTGGTTTGTTAAGACAGTCGT 52 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAG 173 |||||||||||||| |||||||| | ||| ||||||||| | |||||| Sbjct 51 GAAATCCCCGGGCTCAACCTGGGCACTGCGATTGTGACTGGCAGGCTAGAG 1 >seq27309 Length=405 Score = 185 bits (204), Expect = 2e-44 Identities = 225/307 (73%), Gaps = 0/307 (0%) Strand=Plus/Minus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 |||||||| |||||||| |||||||||||||||||||||||||||| || || |||||| Sbjct 307 GAATAAGCTCCGGCTAATTACGTGCCAGCAGCCGCGGTAATACGTAAGGAGCGAGCGTTG 248 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130 ||||||||| ||||||||||| | | |||||| | |||| | ||||| ||| || Sbjct 247 TTCGGAATTATTGGGCGTAAAGGGCATGTAGGCGGACATATAAGTCTGGTGTTAAAGGCC 188 Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTG 190 ||||||| ||| || | | ||| | ||||||| | | ||| || | Sbjct 187 ACAGCTTAACTGTGGAGAGGCGCTGGAAACTATATGACTAGAATTTTGCAGGGGAAACTA 128 Query 191 GAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCA 250 ||||| | |||||| ||| ||| || ||||| | ||||| ||| ||||||||| Sbjct 127 GAATTTCTGGTGTAGGGGTGGAATCTGTTGATATCAGAAGGAATACCGGAGGCGAAGGCG 68 Query 251 GCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGAT 310 | || || | | ||||||| | | |||||| |||||||||||||||||||||| Sbjct 67 GGTTTCTAGGCAATAATTGACGCTGAGGTGCGAAAGTATGGGGAGCAAACAGGATTAGAT 8 Query 311 ACCCTGG 317 ||||||| Sbjct 7 ACCCTGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1288290475680