Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq52003 288 2e-75 seq40142 111 4e-22 seq15686 105 2e-20 >seq52003 Length=576 Score = 288 bits (318), Expect = 2e-75 Identities = 194/217 (89%), Gaps = 9/217 (4%) Strand=Plus/Minus Query 12 TGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGT 71 |||||||||||| ||||||| ||| ||||||||| || |||||||| | |||||||| Sbjct 208 TGCATCTTCACAAACATTTCAACTTCGCTGAGTCTCAGGAGGAGACAGTGTGGCCATCGT 149 Query 72 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 148 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 89 Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCAT 191 || |||||||||||||||||| |||||||||||||||||||| || ||||||| Sbjct 88 ATAGTTACGGCCGCCGTTTACTGGGGCTTCGATCAAGAGCTT-GC--------ACCCCAT 38 Query 192 CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCT 228 || |||||||||| ||||||||||||||||||||||| Sbjct 37 CACTTAACCTTCCAGCACCGGGCAGGCGTCACACCCT 1 >seq40142 Length=429 Score = 111 bits (122), Expect = 4e-22 Identities = 88/103 (85%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 315 GAGCAAGTC-CTTCACCCTCAC-CGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGC 372 ||||||||| |||||| || | |||| ||||||||||||||||||||||| | ||||| Sbjct 395 GAGCAAGTCGCTTCACGCTAATGCGGCACACCTTCTCCCGAAGTTACGGTGTCAATTTGC 336 Query 373 CTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415 | ||||||||| || |||||||||||||| |||| | |||||| Sbjct 335 CGAGTTCCTTCTCCTGAGTTCTCTCAAGCACCTTAGAATTCTC 293 >seq15686 Length=257 Score = 105 bits (116), Expect = 2e-20 Identities = 112/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAG--CTAACCCCATC 192 |||||||||||||||||| |||||||| || | |||||| || ||||| | | Sbjct 255 GTTACGGCCGCCGTTTACTGGGGCTTCAATTCACTGCTTCGTATTGCTACTAACAACTCC 196 Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAG 252 |||||||||| |||||||||||| |||| |||||||| || || | || |||| Sbjct 195 TCTTAACCTTCCAGCACCGGGCAGGTGTCAGTCCCTATACCTCTCTTTGCAGATTAGCAG 136 Query 253 AGTGCTGTGTTTTTAATAAACAGTCGC 279 || |||||||||| ||||||||||| Sbjct 135 AGACCTGTGTTTTTGGTAAACAGTCGC 109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1259519720640